RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ORAI1Q96D31 301 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CMBLQ96DG6 245 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 C4orf45Q96LM5 186 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 DGCR6LQ9BY27 220 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 WNT5BQ9H1J7 359 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 C1orf198Q9H425 327 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 RIBC2Q9H4K1 309 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ELOVL3Q9HB03 270 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 NOX4Q9NPH5 578 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 HIF1ANQ9NWT6 349 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 IL20Q9NYY1 176 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 PTTG3PQ9NZH4 202 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF224Q9NZL3 707 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 CRNNQ9UBG3 495 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-220ENST00000553491 BAIAP2Q9UQB8 552 aa3.98□□□□□ -1.77
ATXN3-220ENST00000553491 LOC100509620A0A075B734 347 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 M0R233 179 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 BHLHE40O14503 412 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ARPC3O15145 178 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 SYNGR3O43761 229 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 TLX2O43763 284 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MGRN1O60291 552 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 TXNDC12O95881 172 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NGFP01138 241 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 IGHV4-39P01824 125 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MRPL3P09001 348 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 DAOP14920 347 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 HSD11B1P28845 292 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 BDKRB2P30411 391 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ATP6V1E1P36543 226 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 PDLIM4P50479 330 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 PRKXP51817 358 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 EFNA4P52798 201 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 HCCSP53701 268 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 KLF3P57682 345 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 LSM6P62312 80 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 CCL8P80075 99 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 TNK1Q13470 666 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 AQP6Q13520 282 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 RIPK1Q13546 671 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 APOFQ13790 326 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 GK3PQ14409 553 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 PTGES3Q15185 160 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ATP6AP1Q15904 470 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MOGQ16653 247 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 CCDC92Q53HC0 331 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ELFN2Q5R3F8 820 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ASRGL1Q7L266 308 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 DCXRQ7Z4W1 244 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NAA40Q86UY6 237 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF584Q8IVC4 421 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 OR5AS1Q8N127 324 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 LRRC75A-AS1Q8N1F1 130 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF525Q8N782 197 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ZNF283Q8N7M2 679 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 TCEANCQ8N8B7 351 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 PAPD5Q8NDF8 572 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 OR5L1Q8NGL2 311 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ZNRF4Q8WWF5 429 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 SPTSSAQ969W0 71 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MRPL24Q96A35 216 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ZMYND19Q96E35 227 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NRBF2Q96F24 287 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 CENPNQ96H22 339 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 POM121L2Q96KW2 1035 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 IL4I1Q96RQ9 567 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 GPX7Q96SL4 187 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 DOK1Q99704 481 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 CIB1Q99828 191 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 SMR3AQ99954 134 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 PKP2Q99959 881 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 MRPL37Q9BZE1 423 aaKnown RBP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 BCL2L14Q9BZR8 327 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 OR2J1Q9GZK6 312 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NARFLQ9H6Q4 476 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 WDR76Q9H967 626 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 NTN4Q9HB63 628 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.97□□□□□ -1.77
ATXN3-220ENST00000553491 DNAJC27Q9NZQ0 273 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 STARD10Q9Y365 291 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 FKBP7Q9Y680 259 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ABCA1O95477 2261 aa3.97□□□□□ -1.77
ATXN3-220ENST00000553491 ACANP16112 2415 aa3.96□□□□□ -1.77
ATXN3-220ENST00000553491 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM129A0AVI4 362 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 OR6C6A6NF89 314 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 GGT3PA6NGU5 568 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 M0R129 80 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SPINT2O43291 252 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 PPIHO43447 177 aaKnown RBP3.96□□□□□ -1.78
ATXN3-220ENST00000553491 PLPP2O43688 288 aa3.96□□□□□ -1.78
ATXN3-220ENST00000553491 SELENOFO60613 162 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms