RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 TP53I3Q53FA7 332 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 WDR38Q5JTN6 314 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 ZFAND2BQ8WV99 257 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 AQP3Q92482 292 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 FGF23Q9GZV9 251 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-204ENST00000553324 ACOXLQ9NUZ1 547 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 CTSZQ9UBR2 303 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
SHMT2-204ENST00000553324 IRGMA1A4Y4 181 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 ANKRD61A6NGH8 418 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-204ENST00000553324 J3QLW9 94 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 NDUFB3O43676 98 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 HTR1AP08908 422 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 ZNF19P17023 458 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 HAAOP46952 286 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 OR12D2P58182 307 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 BPIFB3P59826 476 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 LRRC36Q1X8D7 754 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 ODF4Q2M2E3 257 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 STUMQ69YW2 141 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 HAGHLQ6PII5 290 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-204ENST00000553324 RBMS3Q6XE24 437 aaKnown RBP12.74□□□□□ -0.37
SHMT2-204ENST00000553324 SYS1Q8N2H4 156 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 PRSS35Q8N3Z0 413 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 TMIGD2Q96BF3 282 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 UPRTQ96BW1 309 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 CCL13Q99616 98 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 GPR173Q9NS66 373 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 WNK2Q9Y3S1 2297 aa12.74□□□□□ -0.37
SHMT2-204ENST00000553324 PQLC2LA1A4F0 135 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 NOS1APO75052 506 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-204ENST00000553324 RHBDL1O75783 438 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 IGHA1P01876 353 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 ACAA1P09110 424 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-204ENST00000553324 TGM4P49221 684 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 FUT6P51993 359 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 GABPB1Q06547 395 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-204ENST00000553324 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 BTN2A1Q7KYR7 527 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 LHFPL3Q86UP9 236 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 DHRSXQ8N5I4 330 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 C4orf36Q96KX1 117 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 ALG8Q9BVK2 526 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 WDR13Q9H1Z4 485 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 RASSF4Q9H2L5 321 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 VCXQ9H320 206 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 DCLRE1BQ9H816 532 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 CNTD2Q9H8S5 307 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 AMBNQ9NP70 447 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 FRRS1LQ9P0K9 344 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 COL6A5A8TX70 2615 aa12.73□□□□□ -0.37
SHMT2-204ENST00000553324 A6NIN4 97 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ZNF879B4DU55 563 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 C22orf46C9J442 243 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 J3QT63 122 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 DCKP27707 260 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 HILS1P60008 231 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 GMFBP60983 142 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 IL13RA1P78552 427 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 IL18R1Q13478 541 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ALKBH1Q13686 389 aaKnown RBP12.72□□□□□ -0.37
SHMT2-204ENST00000553324 CNN3Q15417 329 aaKnown RBP12.72□□□□□ -0.37
SHMT2-204ENST00000553324 KRTAP24-1Q3LI83 254 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 METTL11BQ5VVY1 283 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 RDH10Q8IZV5 341 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 POC1AQ8NBT0 407 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 OR5T2Q8NGG2 359 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 CYGBQ8WWM9 190 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 PKIBQ9C010 78 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 MS4A7Q9GZW8 240 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-204ENST00000553324 SMURF1Q9HCE7 757 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ERVK13-1Q9NX77 482 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 HHLA2Q9UM44 414 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 MYRFQ9Y2G1 1151 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 HSPE1-MOB4S4R3N1 261 aa12.72□□□□□ -0.37
SHMT2-204ENST00000553324 ARHGAP32A7KAX9 2087 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 LOC107986453A0A1B0GWG9 222 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 H0YAE9 185 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 TRIM77I1YAP6 450 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 CASQ2O14958 399 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-204ENST00000553324 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 TOX4O94842 621 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 PGA5P0DJD9 388 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 MPZP25189 248 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 KIR3DL2P43630 455 aa12.71□□□□□ -0.37
SHMT2-204ENST00000553324 GABRA2P47869 451 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms