RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 MRPS22P82650 360 aaKnown RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 MRPS25P82663 173 aaKnown RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 MYBPC1Q00872 1141 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 SMU1Q2TAY7 513 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 SPATA46Q5T0L3 261 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 TTC19Q6DKK2 380 aaPredicted RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 ANKRD26P1Q6NSI1 321 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 CASP12Q6UXS9 341 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 DPY19L2P2Q6ZN68 376 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 TRPM8Q7Z2W7 1104 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 HMGN2P46Q86SG4 172 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 WDFY1Q8IWB7 410 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 CCDC170Q8IYT3 715 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 ENTHD1Q8IYW4 607 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 SYCE1Q8N0S2 351 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 TCAIMQ8N3R3 496 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 NANPQ8TBE9 248 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 GPR151Q8TDV0 419 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 GPR119Q8TDV5 335 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 ANKRD7Q92527 254 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 CPNE4Q96A23 557 aaPredicted RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 MAGOHBQ96A72 148 aaKnown RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 APH1AQ96BI3 265 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 SLC38A2Q96QD8 506 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 CITED1Q99966 193 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 TM2D1Q9BX74 207 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 MRPL37Q9BZE1 423 aaKnown RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 OR11A1Q9GZK7 315 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 Q9H3A6 140 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 GLIPR2Q9H4G4 154 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 DYNLRB1Q9NP97 96 aa3□□□□□ -1.93
ATXN3-217ENST00000553287 PAQR5Q9NXK6 330 aaPredicted RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 NOSIPQ9Y314 301 aaKnown RBP3□□□□□ -1.93
ATXN3-217ENST00000553287 LYSTQ99698 3801 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 A0A087WZY1 265 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 A0A0G2JMP0 313 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 A0A0X1KG70 313 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 H0YIV9 168 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 H0YL77 283 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SULT2B1O00204 365 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 FOXE1O00358 373 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SCAMP2O15127 329 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 BCAS1O75363 584 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 MRPL33O75394 65 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 KCNK2O95069 426 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 MBD3O95983 291 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 TPM3P06753 285 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 PABPC4LP0CB38 370 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 GFAPP14136 432 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SDC1P18827 310 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 NPR2P20594 1047 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SERPINB1P30740 379 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 PITPNBP48739 271 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 MORF4L2Q15014 288 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 ACSM5Q6NUN0 579 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 ZCCHC12Q6PEW1 402 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 CCDC137Q6PK04 289 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 C4orf22Q6V702 233 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 TMEM179BQ7Z7N9 219 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SERPINA12Q8IW75 414 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 FAM9CQ8IZT9 166 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 RIBC1Q8N443 379 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 NKAIN3Q8N8D7 197 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 Q8N9L7 120 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 FBXO36Q8NEA4 188 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 OR4M2Q8NGB6 313 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 OR4F6Q8NGB9 312 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 ZNF675Q8TD23 568 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 C16orf78Q8WTQ4 265 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 ATP6V1E2Q96A05 226 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 CIDECQ96AQ7 238 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 DTNBP1Q96EV8 351 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 AURKBQ96GD4 344 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 ARL5BQ96KC2 179 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 TSPAN32Q96QS1 320 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 SERPINI1Q99574 410 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 KCNS3Q9BQ31 491 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 OR51B6Q9H340 312 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 NTN4Q9HB63 628 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 NOX3Q9HBY0 568 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 MYOZ1Q9NP98 299 aaPredicted RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 DDX18Q9NVP1 670 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 DCAF16Q9NXF7 216 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 TAS2R9Q9NYW1 312 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 UBAP1Q9NZ09 502 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 KCNE3Q9Y6H6 103 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 TEX264Q9Y6I9 313 aa2.99□□□□□ -1.93
ATXN3-217ENST00000553287 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
ATXN3-217ENST00000553287 IGHV2OR16-5A0A0B4J2B6 119 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 GNG14A0A1W2PPG7 69 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 ISPDA4D126 451 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 TRIM49D1C9J1S8 452 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 TRAPPC2LH3BP13 241 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 DNALI1O14645 258 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 UPK3AO75631 287 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 RP2O75695 350 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 BCAS2O75934 225 aaPredicted RBP2.98□□□□□ -1.93
ATXN3-217ENST00000553287 OR4F21O95013 312 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 SEMA3DO95025 777 aa2.98□□□□□ -1.93
ATXN3-217ENST00000553287 PSMG1O95456 288 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms