RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 H0YAE9 185 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 GPR137BO60478 399 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 SULT1C4O75897 302 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ECDO95905 644 aaPredicted RBP9.78□□□□□ -0.84
CKAP4-202ENST00000552828 CA6P23280 308 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ANOS1P23352 680 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 DDOSTP39656 456 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 CAPGP40121 348 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 IER3P46695 156 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ACTC1P68032 377 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ACTA1P68133 377 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 HOXA4Q00056 320 aaPredicted RBP9.78□□□□□ -0.84
CKAP4-202ENST00000552828 IL18R1Q13478 541 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 OR8G1Q15617 311 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 GFOD2Q3B7J2 385 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 METTL11BQ5VVY1 283 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 SFRP4Q6FHJ7 346 aaPredicted RBP9.78□□□□□ -0.84
CKAP4-202ENST00000552828 PLEKHG7Q6ZR37 379 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 TECTBQ96PL2 329 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 SMURF1Q9HCE7 757 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 AMBNQ9NP70 447 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 MRPL15Q9P015 296 aaKnown RBP9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF319Q9P2F9 582 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 ZNF391Q9UJN7 358 aa9.78□□□□□ -0.84
CKAP4-202ENST00000552828 RPL36Q9Y3U8 105 aaKnown RBP9.78□□□□□ -0.84
CKAP4-202ENST00000552828 TRAV38-1A0A0B4J264 116 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 DAPL1A0PJW8 107 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 OOEPA6NGQ2 149 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 METTL15A6NJ78 407 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 H0YJX3 145 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 MAGEB4O15481 346 aaPredicted RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 ADAM20O43506 726 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 DENRO43583 198 aaKnown RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 FCN3O75636 299 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 CLIC3O95833 236 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 FADS2O95864 444 aaKnown RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 LHBP01229 141 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 IGHV4-59P01825 116 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 DBTP11182 482 aaKnown RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 HSPA13P48723 471 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 FAM3AP98173 230 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF91Q05481 1191 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 TAF9Q16594 264 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 KLHL22Q53GT1 634 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 SSX6Q7RTT6 188 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 ACBD7Q8N6N7 88 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 YIPF7Q8N8F6 280 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 SPERTQ8NA61 448 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 ZSCAN4Q8NAM6 433 aaPredicted RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 OR8B12Q8NGG6 310 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 APH1BQ8WW43 257 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 LGALS12Q96DT0 336 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 DMRTB1Q96MA1 342 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 PBOV1Q9GZY1 135 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 C16orf95Q9H693 158 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 FAM206AQ9NX38 181 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 KAAG1Q9UBP8 84 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 MRM2Q9UI43 246 aaKnown RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 EXOGQ9Y2C4 368 aaKnown RBP9.77□□□□□ -0.85
CKAP4-202ENST00000552828 R4GMQ9 66 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 HSPE1-MOB4S4R3N1 261 aa9.77□□□□□ -0.85
CKAP4-202ENST00000552828 DOCK11Q5JSL3 2073 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 A0A0U1RQK1 487 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 A0A0U1RQV5 110 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 ANKRD30BLA7E2S9 258 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 LOC110117498-PIK3R3F6TDL0 507 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 J3QRE1 110 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 WBP4O75554 376 aaKnown RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 RPP14O95059 124 aaKnown RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 GSK3AP49840 483 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 ISL1P61371 349 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 ZNF85Q03923 595 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 RAB40BQ12829 278 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 MED21Q13503 144 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 OR8B8Q15620 311 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 BTN2A1Q7KYR7 527 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 FAM220AQ7Z4H9 259 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 KCTD20Q7Z5Y7 419 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 FAM90A1Q86YD7 464 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 C8orf59Q8N0T1 100 aaPredicted RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 FTMTQ8N4E7 242 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 PIP4P2Q8N4L2 257 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 GCSAMQ8N6F7 178 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 LY6G5BQ8NDX9 201 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 CSNK2A3Q8NEV1 391 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 OR56B2PQ8NGI1 322 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 TFAP2CQ92754 450 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 LHX4Q969G2 390 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 ITFG2Q969R8 447 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 MRPL48Q96GC5 212 aaKnown RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 ADAT1Q9BUB4 502 aaKnown RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 Q9H521 79 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 CNTD2Q9H8S5 307 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 MOB1AQ9H8S9 216 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 MRPS18AQ9NVS2 196 aaKnown RBP9.76□□□□□ -0.85
CKAP4-202ENST00000552828 C1orf123Q9NWV4 160 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 NDUFA13Q9P0J0 144 aa9.76□□□□□ -0.85
CKAP4-202ENST00000552828 NUFIP1Q9UHK0 495 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms