RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	SSX8	Q7RTT4	187 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	FAM89B	Q8N5H3	189 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	BHLHE23	Q8NDY6	225 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	ENKUR	Q8TC29	256 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR5P3	Q8WZ94	311 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	AQP3	Q92482	292 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	MARS2	Q96GW9	593 aa	Known RBP	10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	NICN1	Q9BSH3	213 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	TM2D1	Q9BX74	207 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	FGF23	Q9GZV9	251 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	ELL3	Q9HB65	397 aa	Predicted RBP	10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	NPAP1	Q9NZP6	1156 aa		10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	NOP16	Q9Y3C1	178 aa	Known RBP	10.89	□□□□□ -0.67
CACNB3-223	ENST00000552480	ANKRD20A5P	A0PJZ0	165 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	WIPF3	A6NGB9	483 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR5B21	A6NL26	309 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480		H7C417	338 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	SPRY1	O43609	319 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	RBBP9	O75884	186 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	LPL	P06858	475 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	MPV17	P39210	176 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	GPM6A	P51674	278 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	ST3GAL2	Q16842	350 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	CDNF	Q49AH0	187 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	SAXO1	Q8IYX7	474 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	CHST4	Q8NCG5	386 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR51T1	Q8NGJ9	327 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	OR10K1	Q8NGX5	313 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	KLF14	Q8TD94	323 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	GPX8	Q8TED1	209 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	NEDD4L	Q96PU5	975 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	PCDHB16	Q9NRJ7	776 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	KLK11	Q9UBX7	282 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	MTFP1	Q9UDX5	166 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	OSGIN2	Q9Y236	505 aa		10.88	□□□□□ -0.67
CACNB3-223	ENST00000552480	INTS1	Q8N201	2190 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	IGKV1-12	A0A0C4DH73	117 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	FAM240B	A0A1B0GVZ2	78 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	NAP1L6	A6NFF2	107 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZNF732	B4DXR9	585 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ANGPTL7	O43827	346 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	LILRA1	O75019	489 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	HTR3B	O95264	441 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	PLAT	P00750	562 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	IGKV1D-12	P01611	117 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	CSTB	P04080	98 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	MELTF	P08582	738 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	GSTP1	P09211	210 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	CSF1	P09603	554 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	KITLG	P21583	273 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	CA6	P23280	308 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	CPT2	P23786	658 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	KIR2DL3	P43628	341 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ACTB	P60709	375 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ACTG1	P63261	375 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	GUCA2A	Q02747	115 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	PSG7	Q13046	419 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZNF718	Q3SXZ3	478 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	MBNL2	Q5VZF2	373 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	SEZ6L2	Q6UXD5	910 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480		Q6ZTK2	550 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	CALHM1	Q8IU99	346 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZNF611	Q8N823	705 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	DUSP18	Q8NEJ0	188 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	DEDD2	Q8WXF8	326 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	DVL3	Q92997	716 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	SEH1L	Q96EE3	360 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	RNF170	Q96K19	258 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480		Q96M66	194 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	RTL8A	Q9BWD3	113 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	SELENOI	Q9C0D9	397 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	TAS2R8	Q9NYW2	309 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	PURG	Q9UJV8	347 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	SPEF1	Q9Y4P9	236 aa		10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	SPEN	Q96T58	3664 aa	Known RBP	10.87	□□□□□ -0.67
CACNB3-223	ENST00000552480	MGA	Q8IWI9	3026 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	FUOM	A2VDF0	154 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM235	A6NFC5	223 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	CCL21	O00585	134 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	SOCS1	O15524	211 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	CRYAA	P02489	173 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	GTF2F2	P13984	249 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	PPP3CB	P16298	524 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	HIST1H1D	P16402	221 aa	Known RBP	10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	SLC6A1	P30531	599 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	GCH1	P30793	250 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	BTC	P35070	178 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	HAAO	P46952	286 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	ASCL1	P50553	236 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	BCAP31	P51572	246 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	GNG3	P63215	75 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	ARL6IP1	Q15041	203 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	PNLIPRP3	Q17RR3	467 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	OLFML2A	Q68BL7	652 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	ALKBH2	Q6NS38	261 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	SLC25A26	Q70HW3	274 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	TMEM200A	Q86VY9	491 aa		10.86	□□□□□ -0.67
CACNB3-223	ENST00000552480	ZNF573	Q86YE8	665 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms