RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TSSK6Q9BXA6 273 aa7.96□□□□□ -1.14
TRAFD1-207ENST00000550051 PRSS22Q9GZN4 317 aa7.96□□□□□ -1.14
TRAFD1-207ENST00000550051 ELL3Q9HB65 397 aaPredicted RBP7.96□□□□□ -1.14
TRAFD1-207ENST00000550051 C19orf12Q9NSK7 152 aa7.96□□□□□ -1.14
TRAFD1-207ENST00000550051 COL7A1Q02388 2944 aa7.96□□□□□ -1.14
TRAFD1-207ENST00000550051 A6NDX4 124 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 IFNGP01579 166 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 H2BFMP0C1H6 154 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 GSTT1P30711 240 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 DYNLT3P51808 116 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 RPL31P62899 125 aaKnown RBP7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 GNG3P63215 75 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 CD83Q01151 205 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 HABP2Q14520 560 aaPredicted RBP7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 CNN3Q15417 329 aaKnown RBP7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 CEACAM21Q3KPI0 293 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 ZDHHC23Q8IYP9 409 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 FAM185AQ8N0U4 392 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 ZNF561Q8N587 486 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 RNF148Q8N7C7 305 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 TMEM185AQ8NFB2 350 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 OR2T33Q8NG76 320 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 OR9Q2Q8NGE9 314 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 LYZL4Q96KX0 146 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 AMELYQ99218 206 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 NKX3-1Q99801 234 aaPredicted RBP7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 YY1AP1Q9H869 796 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 BRD7Q9NPI1 651 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 DNAJC27Q9NZQ0 273 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 MAGEL2Q9UJ55 1249 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 PITPNC1Q9UKF7 332 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 TCF19Q9Y242 345 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 LYVE1Q9Y5Y7 322 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 V9GYQ6 96 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
TRAFD1-207ENST00000550051 ACOD1A6NK06 481 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 RFPL4AA6NLU0 287 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 C17orf98A8MV24 154 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 ZNF732B4DXR9 585 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 RFPL4AL1F8VTS6 287 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 K7EIL1 84 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 TNFRSF11BO00300 401 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 MPIG6BO95866 241 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 PRDX6P30041 224 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 PRDX2P32119 198 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 MAP2K3P46734 347 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 RAB13P51153 203 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 GPM6AP51674 278 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 ERVFRD-1P60508 538 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 GFOD2Q3B7J2 385 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 SAMD4BQ5PRF9 694 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 ACP7Q6ZNF0 438 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 THAP5Q7Z6K1 395 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 ERI1Q8IV48 349 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 DYNAPQ8N1N2 210 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 CD177Q8N6Q3 437 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 OR6N2Q8NGY6 317 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 OTOSQ8NHW6 89 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 RPS4Y2Q8TD47 263 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 AQP3Q92482 292 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 NSMCE2Q96MF7 247 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 DGCR6LQ9BY27 220 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 MYLK2Q9H1R3 596 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 NIPAL2Q9H841 368 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 CMC2Q9NRP2 79 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 TBC1D23Q9NUY8 699 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 USE1Q9NZ43 259 aa7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
TRAFD1-207ENST00000550051 A0A0U1RQV5 110 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 OR5B21A6NL26 309 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 RIIAD1A6NNX1 92 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 NOS1APO75052 506 aaPredicted RBP7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 SASH3O75995 380 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 CCNB2O95067 398 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 RBP4P02753 201 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 LYNP07948 512 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 ATP6V1B1P15313 513 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 IGLL1P15814 213 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 H2AFXP16104 143 aaPredicted RBP7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 ZNF3P17036 446 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 CD33P20138 364 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 MSX2P35548 267 aaPredicted RBP7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 BLCAPP62952 87 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 SPATS1Q496A3 300 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 CD300LDQ6UXZ3 194 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 Q6ZS46 218 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 LHFPL4Q7Z7J7 247 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 AQP11Q8NBQ7 271 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 POC1AQ8NBT0 407 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 OR11H6Q8NGC7 330 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 OR8B12Q8NGG6 310 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 OR2T27Q8NH04 317 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 THEM6Q8WUY1 208 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 FOXRED1Q96CU9 486 aaPredicted RBP7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 KMT2CQ8NEZ4 4911 aaKnown RBP7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 DSCAML1Q8TD84 2053 aa7.93□□□□□ -1.14
TRAFD1-207ENST00000550051 FAM183AA6NL82 134 aa7.92□□□□□ -1.14
TRAFD1-207ENST00000550051 FAM90A22PA8MWA6 464 aa7.92□□□□□ -1.14
TRAFD1-207ENST00000550051 ODF3BA8MYP8 253 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms