RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 OR2AT4A6NND4 320 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A22PA8MWA6 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A12PA8MX19 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A5PA8MXJ8 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A23PA8MXZ1 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM25EA8MYX2 175 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 KRBOX1C9JBD0 128 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 TERTO14746 1132 aaKnown RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 NEURL1O76050 574 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 HTR3BO95264 441 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 DBHP09172 617 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A15PP0C7V4 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A13PP0C7W8 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A14PP0C7W9 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 FAM90A24PP0C7X0 464 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ZNF806P0C7X5 589 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 PGAM2P15259 253 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ZNF708P17019 499 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 M6PRP20645 277 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 STARP49675 285 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 BAMBIQ13145 260 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 OR8B8Q15620 311 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 HYAL4Q2M3T9 481 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 C2orf68Q2NKX9 166 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SNAI3Q3KNW1 292 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SPINK14Q6IE38 97 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 KCTD9Q7L273 389 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SGPP2Q8IWX5 399 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SAXO1Q8IYX7 474 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 OR5M9Q8NGP3 310 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 CASTOR1Q8WTX7 329 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 PPP1R1CQ8WVI7 109 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 NANOS1Q8WY41 292 aaKnown RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 RBPMSQ93062 196 aaKnown RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SPSB4Q96A44 273 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 APH1AQ96BI3 265 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 WDR89Q96FK6 387 aaPredicted RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 Q96M66 194 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ALKBH3Q96Q83 286 aaPredicted RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 SOX7Q9BT81 388 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 C1QTNF5Q9BXJ0 243 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 WNT5BQ9H1J7 359 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 GPR173Q9NS66 373 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ZFP57Q9NU63 452 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ZNF701Q9NV72 531 aaPredicted RBP7.8□□□□□ -1.16
TMEM116-209ENST00000550020 ASXL3Q9C0F0 2248 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 REV3LO60673 3130 aa7.8□□□□□ -1.16
TMEM116-209ENST00000550020 TRAV14DV4A0A0A6YYC5 116 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 PIGBOS1A0A0B4J2F0 54 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 hCG_38984A0A1B0GV85 526 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 C13orf42A0A1B0GVH6 325 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 DBX1A6NMT0 343 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 I3L521 148 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 NME2P1O60361 137 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 RAD51DO75771 328 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 TNFSF15O95150 251 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 IFNA2P01563 188 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 IFNA21P01568 189 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 CTSDP07339 412 aaPredicted RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 SP1P08047 785 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 NME2P22392 152 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 GABRR1P24046 479 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 MPGP29372 298 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 RBMXP38159 391 aaKnown RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 NPY4RP50391 375 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 LHX2P50458 406 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 AANATQ16613 207 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 PABPC1L2AQ5JQF8 200 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 PLCXD3Q63HM9 321 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 EIF5AL1Q6IS14 154 aaKnown RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 C17orf107Q6ZR85 190 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 MOB3CQ70IA8 216 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 OVCH2Q7RTZ1 564 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 MRPL21Q7Z2W9 205 aaKnown RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 LHFPL1Q86WI0 220 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 SKA3Q8IX90 412 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 OSR2Q8N2R0 312 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 TMEM178AQ8NBL3 297 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 OR5D18Q8NGL1 313 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 AKR7LQ8NHP1 331 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 ADAMTS17Q8TE56 1095 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 ABHD3Q8WU67 409 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 APOBEC3DQ96AK3 386 aaPredicted RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 HIST1H2AAQ96QV6 131 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 ARPC5LQ9BPX5 153 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 CMSS1Q9BQ75 279 aaKnown RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 TTTY12Q9BZ98 90 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 DNTTIP1Q9H147 329 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 METTL8Q9H825 291 aaKnown RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 CHMP1AQ9HD42 196 aaPredicted RBP7.79□□□□□ -1.16
TMEM116-209ENST00000550020 ACKR4Q9NPB9 350 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 FAM86C1Q9NVL1 165 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 C1orf123Q9NWV4 160 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 FOXJ2Q9P0K8 574 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 ANXA10Q9UJ72 324 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 OSGIN2Q9Y236 505 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 KCNIP3Q9Y2W7 256 aa7.79□□□□□ -1.16
TMEM116-209ENST00000550020 SEC16AO15027 2179 aa7.78□□□□□ -1.16
TMEM116-209ENST00000550020 TRBV6-7A0A0A0MS04 114 aa7.78□□□□□ -1.16
TMEM116-209ENST00000550020 NUDT19A8MXV4 375 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms