RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 SLC1A7O00341 560 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 PRR23D2P0DMB1 279 aaPredicted RBP11.03□□□□□ -0.64
TROAP-211ENST00000549891 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
TROAP-211ENST00000549891 PPP1R8Q12972 351 aaKnown RBP11.03□□□□□ -0.64
TROAP-211ENST00000549891 GK3PQ14409 553 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 SMIM21Q3B7S5 101 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 OR2T5Q6IEZ7 315 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 KRT74Q7RTS7 529 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 THAP5Q7Z6K1 395 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 ZNF561Q8N587 486 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 OR8B12Q8NGG6 310 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 OR5A2Q8NGI9 324 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 OR2T29Q8NH02 315 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 AJUBAQ96IF1 538 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 CDCA4Q9BXL8 241 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 FAM107BQ9H098 131 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 ZNF446Q9NWS9 450 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 USE1Q9NZ43 259 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 ZNF222Q9UK12 451 aa11.03□□□□□ -0.64
TROAP-211ENST00000549891 A0A0U1RQV5 110 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 ACOD1A6NK06 481 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 PRODHO43272 600 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 SNX3O60493 162 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 FBXO24O75426 580 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 ATP6V1B1P15313 513 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 ERVFRD-1P60508 538 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 FAM98BQ52LJ0 330 aaKnown RBP11.02□□□□□ -0.65
TROAP-211ENST00000549891 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 KRT77Q7Z794 578 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 COMMD2Q86X83 199 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 OR10G2Q8NGC3 310 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 MRAPQ8TCY5 172 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 AQP3Q92482 292 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 NKX3-1Q99801 234 aaPredicted RBP11.02□□□□□ -0.65
TROAP-211ENST00000549891 FGF23Q9GZV9 251 aaPredicted RBP11.02□□□□□ -0.65
TROAP-211ENST00000549891 MUC13Q9H3R2 512 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 YY1AP1Q9H869 796 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 NOTCH3Q9UM47 2321 aa11.02□□□□□ -0.65
TROAP-211ENST00000549891 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 VGLL3A8MV65 326 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 GSC2O15499 205 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 SELENOFO60613 162 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 PEX14O75381 377 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
TROAP-211ENST00000549891 PRB2P02812 416 aaPredicted RBP11.01□□□□□ -0.65
TROAP-211ENST00000549891 ATP6V1B2P21281 511 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 BMXP51813 675 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 MNAT1P51948 309 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 LOXL3P58215 753 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 RIPPLY1Q0D2K3 151 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 NSUN5P1Q3KNT7 163 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 SLC35D3Q5M8T2 416 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 ZBTB37Q5TC79 503 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 PLBD1Q6P4A8 553 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 KCTD18Q6PI47 426 aaPredicted RBP11.01□□□□□ -0.65
TROAP-211ENST00000549891 HAGHLQ6PII5 290 aaPredicted RBP11.01□□□□□ -0.65
TROAP-211ENST00000549891 ACP7Q6ZNF0 438 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 CALHM1Q8IU99 346 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 IQCF1Q8N6M8 205 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 SGCDQ92629 289 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 FOXRED1Q96CU9 486 aaPredicted RBP11.01□□□□□ -0.65
TROAP-211ENST00000549891 NIPSNAP1Q9BPW8 284 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 C1orf21Q9H246 121 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 ABCB10Q9NRK6 738 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 NECAP2Q9NVZ3 263 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 LAMP5Q9UJQ1 280 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 PITPNC1Q9UKF7 332 aa11.01□□□□□ -0.65
TROAP-211ENST00000549891 DSCAML1Q8TD84 2053 aa11□□□□□ -0.65
TROAP-211ENST00000549891 TMEM269A0A1B0GVZ9 245 aa11□□□□□ -0.65
TROAP-211ENST00000549891 TCRBV5S2A0A599 114 aa11□□□□□ -0.65
TROAP-211ENST00000549891 ARRDC5A6NEK1 342 aa11□□□□□ -0.65
TROAP-211ENST00000549891 CHST1O43916 411 aa11□□□□□ -0.65
TROAP-211ENST00000549891 HMGN1P05114 100 aa11□□□□□ -0.65
TROAP-211ENST00000549891 FAHP16930 419 aa11□□□□□ -0.65
TROAP-211ENST00000549891 RPS7P62081 194 aaKnown RBP11□□□□□ -0.65
TROAP-211ENST00000549891 OXLD1Q5BKU9 147 aa11□□□□□ -0.65
TROAP-211ENST00000549891 LCN1P1Q5VSP4 162 aa11□□□□□ -0.65
TROAP-211ENST00000549891 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
TROAP-211ENST00000549891 TMEM200BQ69YZ2 307 aa11□□□□□ -0.65
TROAP-211ENST00000549891 DEGS2Q6QHC5 323 aa11□□□□□ -0.65
TROAP-211ENST00000549891 MOB3CQ70IA8 216 aa11□□□□□ -0.65
TROAP-211ENST00000549891 DHFR2Q86XF0 187 aa11□□□□□ -0.65
TROAP-211ENST00000549891 NDUFA11Q86Y39 141 aa11□□□□□ -0.65
TROAP-211ENST00000549891 ARHGAP24Q8N264 748 aa11□□□□□ -0.65
TROAP-211ENST00000549891 Q8N2B8 174 aa11□□□□□ -0.65
TROAP-211ENST00000549891 POC1AQ8NBT0 407 aa11□□□□□ -0.65
TROAP-211ENST00000549891 OR2T27Q8NH04 317 aa11□□□□□ -0.65
TROAP-211ENST00000549891 RPS4Y2Q8TD47 263 aa11□□□□□ -0.65
TROAP-211ENST00000549891 GIPC3Q8TF64 312 aa11□□□□□ -0.65
TROAP-211ENST00000549891 R3HDM4Q96D70 268 aa11□□□□□ -0.65
TROAP-211ENST00000549891 FEVQ99581 238 aa11□□□□□ -0.65
TROAP-211ENST00000549891 TEX12Q9BXU0 123 aa11□□□□□ -0.65
TROAP-211ENST00000549891 MROQ9BYG7 248 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms