RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PLPPR2Q96GM1 343 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 SERPINE3A8MV23 424 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 PIN1P1O15428 100 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 CDC14BO60729 498 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 CNR1P21554 472 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 RAC3P60763 192 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 SSBP1Q04837 148 aaKnown RBP14.41□□□□□ -0.1
CUX1-213ENST00000549414 EIF3IQ13347 325 aaKnown RBP14.41□□□□□ -0.1
CUX1-213ENST00000549414 MSMO1Q15800 293 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 OR8G2PQ6IF36 304 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 ARRDC1Q8N5I2 433 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 H1FXQ92522 213 aaKnown RBP14.41□□□□□ -0.1
CUX1-213ENST00000549414 GHRLQ9UBU3 117 aa14.41□□□□□ -0.1
CUX1-213ENST00000549414 NME2P1O60361 137 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 DXOO77932 396 aaKnown RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 AQP8O94778 261 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 NFYBP25208 207 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 RAG2P55895 527 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 KLF9Q13886 244 aaPredicted RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 PLA1AQ53H76 456 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 TOR2AQ5JU69 321 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 PXDC1Q5TGL8 231 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 OR4D10Q8NGI6 311 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 OIT3Q8WWZ8 545 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 FBXW5Q969U6 566 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 SPACA1Q9HBV2 294 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 FNDC1Q4ZHG4 1894 aaPredicted RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 FAM208BQ5VWN6 2430 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 IFNA4P05014 189 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 MEOX1P50221 254 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 SRPXP78539 464 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 ZXDAP98168 799 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 PLPPR5Q32ZL2 321 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 OR13C8Q8NGS7 320 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 RNF133Q8WVZ7 376 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 ZNRF4Q8WWF5 429 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 AKIRIN1Q9H9L7 192 aaPredicted RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 H3BP45 60 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 LMX1BO60663 402 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 RPL12P30050 165 aaKnown RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 ECI1P42126 302 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 FUT6P51993 359 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 GGTLC2Q14390 218 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 OR8B8Q15620 311 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 EXTL1Q92935 676 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 KISS1RQ969F8 398 aaPredicted RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 RBMXL1Q96E39 390 aaKnown RBP14.4□□□□□ -0.1
CUX1-213ENST00000549414 C20orf24Q9BUV8 137 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 ADAM19Q9H013 955 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 RNF150Q9ULK6 438 aa14.4□□□□□ -0.1
CUX1-213ENST00000549414 ADAP1O75689 374 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 PI4KAP42356 2102 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 EGR4Q05215 589 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 ZNF468Q5VIY5 522 aaPredicted RBP14.39□□□□□ -0.11
CUX1-213ENST00000549414 ZNF626Q68DY1 528 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 CHST6Q9GZX3 395 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 KLF4O43474 513 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 CD80P33681 288 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 H3F3CQ6NXT2 135 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 GFRALQ6UXV0 394 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 BAP18Q8IXM2 172 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 SPSB1Q96BD6 273 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 ESRP2Q9H6T0 727 aaKnown RBP14.39□□□□□ -0.11
CUX1-213ENST00000549414 GFOD1Q9NXC2 390 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 MYLKQ15746 1914 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 ALKBH6Q3KRA9 238 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 ZNF573Q86YE8 665 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 MRPS18BQ9Y676 258 aaKnown RBP14.39□□□□□ -0.11
CUX1-213ENST00000549414 OR6C65A6NJZ3 312 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 GDF9O60383 454 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 CRYAAP02489 173 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 PTGER4P35408 488 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 GCM1Q9NP62 436 aa14.39□□□□□ -0.11
CUX1-213ENST00000549414 TRAV17A0A0B4J275 112 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 AQP7P3A6NL99 342 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 HLA-DQB1P01920 261 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 MZT1Q08AG7 82 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 C2orf50Q96LR7 162 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 OR5B12Q96R08 314 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 TSC2P49815 1807 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 A0A1W2PP11 408 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 GSTZ1O43708 216 aaPredicted RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 SSSCA1O60232 199 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 UPK3AO75631 287 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 RPS4XP62701 263 aaKnown RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 ATPAF1Q5TC12 328 aaPredicted RBP14.38□□□□□ -0.11
CUX1-213ENST00000549414 C11orf87Q6NUJ2 197 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 OR1J1Q8NGS3 322 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 DOCK9Q9BZ29 2069 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 A0A0J9YW62 118 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 VSIG8P0DPA2 414 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 FUT3P21217 361 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 BMP5P22003 454 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 S100PP25815 95 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 MAGEA5P43359 124 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 MMP16P51512 607 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 PNLIPRP3Q17RR3 467 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 ZNF766Q5HY98 468 aa14.38□□□□□ -0.11
CUX1-213ENST00000549414 LINC01590Q5TEZ4 76 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms