RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 ZNF79Q15937 498 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 C2orf76Q3KRA6 126 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF718Q3SXZ3 478 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 ADAM5Q6NVV9 412 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CNIH2Q6PI25 160 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 VHLLQ6RSH7 139 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 UNQ6126/PRO20091Q6UXV3 157 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 LHFPL2Q6ZUX7 228 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 C1QL2Q7Z5L3 287 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 WDR86Q86TI4 376 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 LURAP1LQ8IV03 231 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 C1orf174Q8IYL3 243 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 ZDHHC23Q8IYP9 409 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CMTM4Q8IZR5 234 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 SAMD12Q8N8I0 201 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 NUP37Q8NFH4 326 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 OR8G5Q8NG78 346 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 OR4M1Q8NGD0 313 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 OR5D18Q8NGL1 313 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF671Q8TAW3 534 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 NEUROG1Q92886 237 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 FAM3DQ96BQ1 224 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 FOXRED1Q96CU9 486 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 LRRC46Q96FV0 321 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 PLPPR2Q96GM1 343 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 SDHCQ99643 169 aaPredicted RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 SOSTQ9BQB4 213 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MRPL37Q9BZE1 423 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CXorf56Q9H5V9 222 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 TUBG2Q9NRH3 451 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CYSLTR2Q9NS75 346 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MRPL15Q9P015 296 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 MRPS28Q9Y2Q9 187 aaKnown RBP6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 CACNA1DQ01668 2161 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 COL12A1Q99715 3063 aa6.9□□□□□ -1.3
DEPDC4-207ENST00000549249 RAI1Q7Z5J4 1906 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 CREBBPQ92793 2442 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 IGKV1-12A0A0C4DH73 117 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 LOC100289279A0A1B0GTE1 492 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A1B0GWJ7 208 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A1W2PP11 408 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 TUBAL3A6NHL2 446 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ANKRD30BLA7E2S9 258 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM14DPA8MWL7 114 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM25AB3EWG3 89 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM25CB3EWG5 89 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM25GB3EWG6 89 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 CLDN25C9JDP6 229 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MAGEB3O15480 346 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 TIMM8AO60220 97 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 KDM4BO94953 1096 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 IGKV1D-12P01611 117 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 IGHV3-13P01766 116 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 NAT2P11245 290 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SELEP16581 610 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 IGFBP2P18065 325 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 GCH1P30793 250 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 PEX19P40855 299 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 PTGFRP43088 359 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ALDH3B1P43353 468 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 GPM6AP51674 278 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 FUT6P51993 359 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MTCP1P56278 107 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SCAND1P57086 179 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 RPS23P62266 143 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 UNC119Q13432 240 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 CEACAM21Q3KPI0 293 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 UBE2NLQ5JXB2 153 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 OR10K2Q6IF99 312 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SLC22A25Q6T423 547 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 GLIPR1L1Q6UWM5 242 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 LRRC28Q86X40 367 aaPredicted RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ANGPTL5Q86XS5 388 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 CALHM1Q8IU99 346 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 KRTAP1-3Q8IUG1 177 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 DTX3Q8N9I9 347 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SYNPRQ8TBG9 265 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 S100ZQ8WXG8 99 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 OR5P3Q8WZ94 311 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MRPL24Q96A35 216 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 BORCS8Q96FH0 119 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 DIRAS2Q96HU8 199 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 CEP19Q96LK0 163 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 TECTBQ96PL2 329 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 GPER1Q99527 375 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SYT3Q9BQG1 590 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ADAT1Q9BUB4 502 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MRI1Q9BV20 369 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 WDR12Q9GZL7 423 aaKnown RBP6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ABCG5Q9H222 651 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF442Q9H7R0 627 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 NGBQ9NPG2 151 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 TPSG1Q9NRR2 321 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 RHBDL2Q9NX52 303 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 NDRG3Q9UGV2 375 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SLC7A11Q9UPY5 501 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 SPEF1Q9Y4P9 236 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 MPC1Q9Y5U8 109 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ETV7Q9Y603 341 aa6.89□□□□□ -1.31
DEPDC4-207ENST00000549249 ATP23Q9Y6H3 246 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms