RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SKA2Q8WVK7 121 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 AKR1E2Q96JD6 320 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR5M11Q96RB7 305 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 FGF23Q9GZV9 251 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 PBOV1Q9GZY1 135 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 HHLA2Q9UM44 414 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 IER3IP1Q9Y5U9 82 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ARL2-SNX15V9GYD0 113 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ODF3BA8MYP8 253 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR10H3O60404 316 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 C1QL1O75973 258 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SYNGR4O95473 234 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 IFNA16P05015 189 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLC25A4P12235 298 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 MUC1P15941 1255 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM11P17152 192 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 CELP19835 753 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 PSG4Q00888 419 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF542PQ5EBM4 170 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 RBPMS2Q6ZRY4 209 aaKnown RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SSX6Q7RTT6 188 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 TEX29Q8N6K0 151 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR4M1Q8NGD0 313 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ABHD5Q8WTS1 349 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLC9A6Q92581 669 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF775Q96BV0 537 aaPredicted RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 ARL5BQ96KC2 179 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 GTPBP2Q9BX10 602 aaKnown RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 STMN3Q9NZ72 180 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 DNAJB11Q9UBS4 358 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR52A1Q9UKL2 312 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 IGKV1D-43A0A0B4J1Z2 117 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLC22A20A6NK97 555 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 DEFB108AA8MXU0 73 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 J3QT63 122 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 M0R1W7 72 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 HIST1H2ABP04908 130 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 DANCRP0C864 163 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 AQP2P41181 271 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 RSU1Q15404 277 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 LIPNQ5VXI9 398 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 CST9LP1Q5W188 147 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 CFAP77Q6ZQR2 320 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 HIST3H2AQ7L7L0 130 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 FOXRED2Q8IWF2 684 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 GCSAMQ8N6F7 178 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 HIST1H2ACQ93077 130 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 MRPL24Q96A35 216 aaKnown RBP4.14□□□□□ -1.75
SCAF11-212ENST00000549162 DLL4Q9NR61 685 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 SLCO1C1Q9NYB5 712 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 HSPB7Q9UBY9 170 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OSGIN2Q9Y236 505 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 OR10H1Q9Y4A9 318 aa4.14□□□□□ -1.75
SCAF11-212ENST00000549162 AKAP9Q99996 3911 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 IGHV1-18A0A0C4DH31 117 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 FAM90A26D6RGX4 464 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 J3QLI3 93 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 DCTN6O00399 190 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 CHATP28329 748 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF81P51508 661 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF497Q6ZNH5 498 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ABHD3Q8WU67 409 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ITLN2Q8WWU7 325 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 SGK3Q96BR1 496 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 FAM122AQ96E09 287 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 TRMT61AQ96FX7 289 aaKnown RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 NPAS1Q99742 590 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 MRPL37Q9BZE1 423 aaKnown RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 TMEM138Q9NPI0 162 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 FAIMQ9NVQ4 179 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 IGKV1-9A0A0C4DH69 117 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 NPIPA5E9PKD4 350 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 PAGE4O60829 102 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 REM1O75628 298 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 NXPH2O95156 264 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 SLC2A10O95528 541 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OPN1MWP04001 364 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OPN1MW2P0DN77 364 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OPN1MW3P0DN78 364 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF345Q14585 488 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF672Q499Z4 452 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 C9orf106Q8NAJ2 232 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 ZNF671Q8TAW3 534 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 SPRYD4Q8WW59 207 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 DDB2Q92466 427 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 GAL3ST1Q99999 423 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OR8D2Q9GZM6 311 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 OR10A2Q9H208 303 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 CDC42EP3Q9UKI2 254 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 TP53TG3Q9ULZ0 132 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 NPIPA1Q9UND3 350 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 CMAHPQ9Y471 501 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 IGHV2OR16-5A0A0B4J2B6 119 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 SULT2B1O00204 365 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 DEGS1O15121 323 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 CRYGBP07316 175 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 HOXB4P17483 251 aaPredicted RBP4.13□□□□□ -1.75
SCAF11-212ENST00000549162 MYL12AP19105 171 aa4.13□□□□□ -1.75
SCAF11-212ENST00000549162 GDI2P50395 445 aaKnown RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms