RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BRD7Q9NPI1 651 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 SNTG1Q9NSN8 517 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF281Q9Y2X9 895 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 AP4S1Q9Y587 144 aa10.49□□□□□ -0.73
PTCH1-218ENST00000548945 DNAH3Q8TD57 4116 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 DSCAML1Q8TD84 2053 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 A0A1W2PRD5 423 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 A0A1W2PRF3 423 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 A0A1W2PRM7 423 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 FAM183AA6NL82 134 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 BAG2O95816 211 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 FCGR1AP12314 374 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 POU1F1P28069 291 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 GMFBP60983 142 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 PRB3Q04118 309 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-218ENST00000548945 SLC34A1Q06495 639 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 BEAN1Q3B7T3 259 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 HCP5Q6MZN7 132 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 LIAT1Q6ZQX7 453 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 KCTD8Q6ZWB6 473 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 PQLC1Q8N2U9 271 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 PNKDQ8N490 385 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 OR51G2Q8NGK0 314 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 TEX47Q8TBZ9 253 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 HPSE2Q8WWQ2 592 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 PIGCQ92535 297 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 HIST1H2AAQ96QV6 131 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 SSX3Q99909 188 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 YY1AP1Q9H869 796 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 MED20Q9H944 212 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 NKX1-2Q9UD57 310 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF222Q9UK12 451 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 SAMHD1Q9Y3Z3 626 aaKnown RBP10.48□□□□□ -0.73
PTCH1-218ENST00000548945 LRP12Q9Y561 859 aa10.48□□□□□ -0.73
PTCH1-218ENST00000548945 IGKV1D-17A0A075B6S4 117 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 ARRDC5A6NEK1 342 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 ACOD1A6NK06 481 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 H0YAE9 185 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 PRODHO43272 600 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 RAP2AP10114 183 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 PSG2P11465 335 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 GLRA1P23415 457 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 GPM6AP51674 278 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 PSMA6P60900 246 aaKnown RBP10.47□□□□□ -0.73
PTCH1-218ENST00000548945 GNG3P63215 75 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 PPP1R8Q12972 351 aaKnown RBP10.47□□□□□ -0.73
PTCH1-218ENST00000548945 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 CRIP3Q6Q6R5 217 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 REC114Q7Z4M0 266 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 OR5K1Q8NHB7 308 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 OR2T6Q8NHC8 308 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 PPP1R35Q8TAP8 253 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 SDSLQ96GA7 329 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 FGF23Q9GZV9 251 aaPredicted RBP10.47□□□□□ -0.73
PTCH1-218ENST00000548945 OR51I2Q9H344 312 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 VNN3Q9NY84 501 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 RASL12Q9NYN1 266 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 U3KQV3 271 aa10.47□□□□□ -0.73
PTCH1-218ENST00000548945 A0A0U1RQV5 110 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 A0A1W2PPH5 198 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OR5B21A6NL26 309 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 PRR23D1E9PI22 279 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-218ENST00000548945 H3BN98 237 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 ANGPTL7O43827 346 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 PRR23D2P0DMB1 279 aaPredicted RBP10.46□□□□□ -0.73
PTCH1-218ENST00000548945 ATP6V1B1P15313 513 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 MAP2K3P46734 347 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 GABRA2P47869 451 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 CEACAM21Q3KPI0 293 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 SAMD5Q5TGI4 173 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 ZNRF1Q8ND25 227 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 TMEM185AQ8NFB2 350 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OR10G2Q8NGC3 310 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OR5A2Q8NGI9 324 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 THEM6Q8WUY1 208 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 PPP1R14AQ96A00 147 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OTULINQ96BN8 352 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 NIPSNAP1Q9BPW8 284 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 NPFFR1Q9GZQ6 430 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 OR51V1Q9H2C8 321 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 HEXA-AS1Q9H8Q6 139 aa10.46□□□□□ -0.73
PTCH1-218ENST00000548945 NBEAL2Q6ZNJ1 2754 aa10.46□□□□□ -0.74
PTCH1-218ENST00000548945 hCG_1809904A0A1W2PP81 198 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 A0A1W2PPE2 198 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 A0A1W2PR64 198 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 A0A1W2PRV1 198 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 ZNF732B4DXR9 585 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 G3V4G9 280 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 MTRF1O75570 445 aaKnown RBP10.45□□□□□ -0.74
PTCH1-218ENST00000548945 RHBDL1O75783 438 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 TFF1P04155 84 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 FASP25445 335 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 SLC35D3Q5M8T2 416 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 ZBTB37Q5TC79 503 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 DEGS2Q6QHC5 323 aa10.45□□□□□ -0.74
PTCH1-218ENST00000548945 FAM185AQ8N0U4 392 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms