RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 CCL17Q92583 94 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 RPL3LQ92901 407 aaKnown RBP17.78■□□□□ 0.44
CACNB3-210ENST00000548874 YIPF6Q96EC8 236 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 BORCS8Q96FH0 119 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 C1orf123Q9NWV4 160 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 DCAF16Q9NXF7 216 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 TREM2Q9NZC2 230 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 CKLFQ9UBR5 152 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 STUB1Q9UNE7 303 aa17.78■□□□□ 0.44
CACNB3-210ENST00000548874 DYSFO75923 2080 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 A6NLC8 198 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 CDIPTO14735 213 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 ALDOBP05062 364 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 MPZP25189 248 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 GIFP27352 417 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 CFHR2P36980 270 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 RBMXP38159 391 aaKnown RBP17.77■□□□□ 0.44
CACNB3-210ENST00000548874 ALDH3B2P48448 385 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 RBP2P50120 134 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 DSCR9P59020 149 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 RIN1Q13671 783 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 SHEQ5VZ18 495 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 WDR82Q6UXN9 313 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 ZNF826PQ6ZT77 177 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 OR13F1Q8NGS4 319 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 NEK6Q9HC98 313 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 TMEM138Q9NPI0 162 aa17.77■□□□□ 0.44
CACNB3-210ENST00000548874 PRRC2AP48634 2157 aaKnown RBP17.77■□□□□ 0.43
CACNB3-210ENST00000548874 TRIM64BA6NI03 449 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 TMEM178BH3BS89 294 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 NDUFS8O00217 210 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 ARL6IP5O75915 188 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 FGF9P31371 208 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-210ENST00000548874 HAAOP46952 286 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 ATP1B3P54709 279 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 TMEM33P57088 247 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 CLEC12BQ2HXU8 276 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 HSD17B12Q53GQ0 312 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 HAGHLQ6PII5 290 aaPredicted RBP17.76■□□□□ 0.43
CACNB3-210ENST00000548874 CLEC2AQ6UVW9 174 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 RNF144BQ7Z419 303 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 CALHM1Q8IU99 346 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 OR11L1Q8NGX0 322 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 C10orf105Q8TEF2 133 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 AQP3Q92482 292 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 FAM168AQ92567 244 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 HPS1Q92902 700 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 PKIBQ9C010 78 aa17.76■□□□□ 0.43
CACNB3-210ENST00000548874 CCDC168Q8NDH2 2452 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 J3QT63 122 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 HCKP08631 526 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 OCMP0CE72 109 aaPredicted RBP17.75■□□□□ 0.43
CACNB3-210ENST00000548874 GADD45AP24522 165 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 BDKRB2P30411 391 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 MTCP1P56278 107 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 ANGPTL5Q86XS5 388 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 OR52N4Q8NGI2 321 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 OR10Z1Q8NGY1 313 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 TMIGD2Q96BF3 282 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 SPACA5Q96QH8 159 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 OR51E2Q9H255 320 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 RNF7Q9UBF6 113 aa17.75■□□□□ 0.43
CACNB3-210ENST00000548874 LRRC30A6NM36 301 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 VWC2LB2RUY7 222 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 CLDN25C9JDP6 229 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 RHBDL1O75783 438 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 CYB5R3P00387 301 aaPredicted RBP17.74■□□□□ 0.43
CACNB3-210ENST00000548874 LHBP01229 141 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 SRMP19623 302 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 KISS1Q15726 138 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 CARTPTQ16568 116 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 LRRTM1Q86UE6 522 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 GCSAMQ8N6F7 178 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 TCF7L1Q9HCS4 588 aa17.74■□□□□ 0.43
CACNB3-210ENST00000548874 TXNL4BQ9NX01 149 aaKnown RBP17.74■□□□□ 0.43
CACNB3-210ENST00000548874 IGHV4-30-2A0A087WSY4 118 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 hCG_1807616A0A1W2PRN6 198 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 MAGEB3O15480 346 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 SYNGR1O43759 233 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 MAS1P04201 325 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 IRF2P14316 349 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 ADRA2CP18825 462 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 IL24Q13007 206 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 DDI2Q5TDH0 399 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 C22orf42Q6IC83 251 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 LYPD6Q86Y78 171 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 CDH26Q8IXH8 852 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 C1orf87Q8N0U7 546 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 LRRC29Q8WV35 223 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 CPNE2Q96FN4 548 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-210ENST00000548874 METTL17Q9H7H0 456 aaPredicted RBP17.73■□□□□ 0.43
CACNB3-210ENST00000548874 EXOSC4Q9NPD3 245 aaKnown RBP17.73■□□□□ 0.43
CACNB3-210ENST00000548874 SNTG1Q9NSN8 517 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 SCOCQ9UIL1 159 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 SSR3Q9UNL2 185 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 CSMD1Q96PZ7 3565 aa17.73■□□□□ 0.43
CACNB3-210ENST00000548874 MEGF11A6BM72 1044 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 SRRM5B3KS81 715 aa17.72■□□□□ 0.43
CACNB3-210ENST00000548874 NOS1APO75052 506 aaPredicted RBP17.72■□□□□ 0.43
CACNB3-210ENST00000548874 FSTL3O95633 263 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms