RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 ADI1Q9BV57 179 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 ZNF69Q9UC07 566 aa13.1□□□□□ -0.31
DDX54-205ENST00000548786 SOX21Q9Y651 276 aaPredicted RBP13.1□□□□□ -0.31
DDX54-205ENST00000548786 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 KIR2DS1A0A191URI9 304 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 FAM230AA0A1W2PPH8 454 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 OR5B21A6NL26 309 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 NDUFA2O43678 99 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 SYNGR1O43759 233 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 ENSAO43768 121 aaKnown RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 MPZL2O60487 215 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 PLATP00750 562 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 GLRA1P23415 457 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 CPT2P23786 658 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 HAAOP46952 286 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 NPY4RP50391 375 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 NANOS3P60323 173 aaKnown RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 CDONQ4KMG0 1287 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 ZBTB37Q5TC79 503 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 STUMQ69YW2 141 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 BCL6BQ8N143 479 aaPredicted RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 OR10Z1Q8NGY1 313 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 OR2G2Q8NGZ5 317 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 CNIH3Q8TBE1 160 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 AQP3Q92482 292 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 RNF166Q96A37 237 aaPredicted RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 Q96MT0 163 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 PCGF1Q9BSM1 259 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
DDX54-205ENST00000548786 EXOGQ9Y2C4 368 aaKnown RBP13.09□□□□□ -0.31
DDX54-205ENST00000548786 ANKRD61A6NGH8 418 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 NKX6-3A6NJ46 265 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 INMTO95050 263 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 SFTPBP07988 381 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 HTR1AP08908 422 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 AMY2BP19961 511 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 CCL1P22362 96 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 CFHR2P36980 270 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 GABRA2P47869 451 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 ISL1P61371 349 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 TMEM42Q69YG0 159 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 H1FXQ92522 213 aaKnown RBP13.08□□□□□ -0.32
DDX54-205ENST00000548786 ISG20L2Q9H9L3 353 aaKnown RBP13.08□□□□□ -0.32
DDX54-205ENST00000548786 FRRS1LQ9P0K9 344 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 NLKQ9UBE8 527 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 NUP50Q9UKX7 468 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
DDX54-205ENST00000548786 PQLC2LA1A4F0 135 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 FADS2O95864 444 aaKnown RBP13.07□□□□□ -0.32
DDX54-205ENST00000548786 UBCP0CG48 685 aaKnown RBP13.07□□□□□ -0.32
DDX54-205ENST00000548786 FPR2P25090 351 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 ACTA2P62736 377 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 ACTG2P63267 376 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 CD276Q5ZPR3 534 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 BRD3OSQ6XYD6 125 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 KRT74Q7RTS7 529 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 SLC36A1Q7Z2H8 476 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 ANGPTL5Q86XS5 388 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 SIGLECL1Q8N7X8 197 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.07□□□□□ -0.32
DDX54-205ENST00000548786 OR52I1Q8NGK6 324 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 OR10AC1Q8NH08 325 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 TMIGD2Q96BF3 282 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 PELI1Q96FA3 418 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 GAFA1Q96PS6 74 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 DUX5Q96PT3 197 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 SUCNR1Q9BXA5 334 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 ELL3Q9HB65 397 aaPredicted RBP13.07□□□□□ -0.32
DDX54-205ENST00000548786 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
DDX54-205ENST00000548786 OR2AT4A6NND4 320 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 J3QT63 122 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 NDUFB3O43676 98 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 CEBPDP49716 269 aaPredicted RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 ARF6P62330 175 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 PRB3Q04118 309 aaPredicted RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 GALEQ14376 348 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 UBE2V2Q15819 145 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 DGUOKQ16854 277 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ZNF691Q5VV52 312 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ZNF573Q86YE8 665 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 CALHM1Q8IU99 346 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 PDZD9Q8IXQ8 264 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 OR51A4Q8NGJ6 313 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ANGPTL6Q8NI99 470 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ZNF671Q8TAW3 534 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 C12orf43Q96C57 262 aaKnown RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 ADAT3Q96EY9 351 aaPredicted RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 RDH12Q96NR8 316 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 MS4A7Q9GZW8 240 aaPredicted RBP13.06□□□□□ -0.32
DDX54-205ENST00000548786 ESM1Q9NQ30 184 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ERVK13-1Q9NX77 482 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 ONECUT1Q9UBC0 465 aa13.06□□□□□ -0.32
DDX54-205ENST00000548786 SLC7A11Q9UPY5 501 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms