RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 DMRTC1Q5HYR2 192 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 LCN1P1Q5VSP4 162 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 NCR3LG1Q68D85 454 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 DHRS7BQ6IAN0 325 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 ASPHD2Q6ICH7 369 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 FAHD1Q6P587 224 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 KCTD18Q6PI47 426 aaPredicted RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 C1orf122Q6ZSJ8 110 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 COMMD2Q86X83 199 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 DNAJC9Q8WXX5 260 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 AQP3Q92482 292 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 HIST1H2AAQ96QV6 131 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 MROQ9BYG7 248 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 PBOV1Q9GZY1 135 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 METTL8Q9H825 291 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 GPR84Q9NQS5 396 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 PAPOLBQ9NRJ5 636 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 NUFIP1Q9UHK0 495 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 MAB21L2Q9Y586 359 aa14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 PRKDCP78527 4128 aaKnown RBP14.23□□□□□ -0.13
CHMP1A-205ENST00000548650 MEIOCA2RUB1 952 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 BTBD17A6NE02 478 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 OR5B21A6NL26 309 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TIMM23O14925 209 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 SRSF10O75494 262 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 ATP6V1B1P15313 513 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 UBE2E1P51965 193 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 CRISP1P54107 249 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 DNAL1Q4LDG9 190 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 ZBTB37Q5TC79 503 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 HCP5Q6MZN7 132 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF679Q8IYX0 411 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNRF1Q8ND25 227 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TMEM185AQ8NFB2 350 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 OR51E1Q8TCB6 317 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 ITFG2Q969R8 447 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 DUS3LQ96G46 650 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 SDSLQ96GA7 329 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TEAD3Q99594 435 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 RBM4BQ9BQ04 359 aaKnown RBP14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TEX12Q9BXU0 123 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 MMP27Q9H306 513 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 C16orf95Q9H693 158 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 YY1AP1Q9H869 796 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TVP23BQ9NYZ1 205 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 POMPQ9Y244 141 aa14.22□□□□□ -0.13
CHMP1A-205ENST00000548650 TRBV23-1A0A0A0MS06 115 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 M0R129 80 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 PRKYO43930 277 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF254O75437 659 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 PAHP00439 452 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 TTRP02766 147 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 GABRA2P47869 451 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 ZNF829Q3KNS6 432 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 PLCXD3Q63HM9 321 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 HAGHLQ6PII5 290 aaPredicted RBP14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 OR5A2Q8NGI9 324 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 OR5R1Q8NH85 324 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 ASB17Q8WXJ9 295 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 CNN2Q99439 309 aaKnown RBP14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 PIGLQ9Y2B2 252 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 TMEM14AQ9Y6G1 99 aa14.21□□□□□ -0.13
CHMP1A-205ENST00000548650 GYG2O15488 501 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 MTRF1O75570 445 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 DHRS3O75911 302 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 TSPAN9O75954 239 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 DAPP51397 102 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 RIDAP52758 137 aaKnown RBP14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 ACSM1Q08AH1 577 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 RIPPLY1Q0D2K3 151 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 ACP7Q6ZNF0 438 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 MOB3CQ70IA8 216 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 THAP5Q7Z6K1 395 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 POC1AQ8NBT0 407 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 BEND2Q8NDZ0 799 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 C17orf50Q8WW18 174 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 PPP1R14AQ96A00 147 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 SLC7A6OSQ96CW6 309 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 NRBF2Q96F24 287 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 MOB1AQ9H8S9 216 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 C19orf12Q9NSK7 152 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 ENPP5Q9UJA9 477 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 IKZF2Q9UKS7 526 aa14.2□□□□□ -0.14
CHMP1A-205ENST00000548650 DSCAML1Q8TD84 2053 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 TET2Q6N021 2002 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 TSPAN15O95858 294 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 BLMHQ13867 455 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 PTGES3Q15185 160 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 SMIM21Q3B7S5 101 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 TMEM42Q69YG0 159 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 BCDIN3DQ7Z5W3 292 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 FAM185AQ8N0U4 392 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 CD177Q8N6Q3 437 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF671Q8TAW3 534 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 UTP4Q969X6 686 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 AJUBAQ96IF1 538 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 ZNF488Q96MN9 340 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 ADGRL4Q9HBW9 690 aa14.19□□□□□ -0.14
CHMP1A-205ENST00000548650 TCF7L1Q9HCS4 588 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms