RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ENTPD6O75354 484 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 SULT1C4O75897 302 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF205O95201 554 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 TTRP02766 147 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ISL1P61371 349 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 PAX2Q02962 417 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-217ENST00000548420 GFOD2Q3B7J2 385 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF829Q3KNS6 432 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-217ENST00000548420 FAM201AQ5SY85 155 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 MEDAGQ5VYS4 303 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 WDR86Q86TI4 376 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ELMOD2Q8IZ81 293 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 FTMTQ8N4E7 242 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 OR11L1Q8NGX0 322 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 RHOXF1Q8NHV9 184 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 MUC7Q8TAX7 377 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 TTTY10Q9BZA0 68 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ABCB9Q9NP78 766 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 IMPAD1Q9NX62 359 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 MIOXQ9UGB7 285 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 IKZF2Q9UKS7 526 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH1-217ENST00000548420 R4GMQ9 66 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 FRAS1Q86XX4 4008 aa11.51□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF816-ZNF321PA0A0X1KG74 233 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 A0A1B0GTI1 187 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 GRPP07492 148 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 PPIAL4GP0DN37 164 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 IRF2P14316 349 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 IGLL1P15814 213 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 PSMB10P40306 273 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 MAP2K3P46734 347 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 IL5RAQ01344 420 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 HERPUD1Q15011 391 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 ZBTB37Q5TC79 503 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 GCSAMQ8N6F7 178 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 OR1M1Q8NGA1 313 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 OR51E1Q8TCB6 317 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 OR5P3Q8WZ94 311 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-217ENST00000548420 PAPOLGQ9BWT3 736 aaKnown RBP11.5□□□□□ -0.57
PTCH1-217ENST00000548420 FGF23Q9GZV9 251 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-217ENST00000548420 MOB1AQ9H8S9 216 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 RNPEPL1Q9HAU8 725 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 GPR84Q9NQS5 396 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 FAM118AQ9NWS6 357 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 EXOGQ9Y2C4 368 aaKnown RBP11.5□□□□□ -0.57
PTCH1-217ENST00000548420 LRCH1Q9Y2L9 728 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 GMPPBQ9Y5P6 360 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
PTCH1-217ENST00000548420 LOC100130705A0A1B0GUX0 176 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 RBMY1BA6NDE4 496 aaKnown RBP11.49□□□□□ -0.57
PTCH1-217ENST00000548420 RBMY1EA6NEQ0 496 aaKnown RBP11.49□□□□□ -0.57
PTCH1-217ENST00000548420 METTL15A6NJ78 407 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF850A8MQ14 1090 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 LOC110117498-PIK3R3F6TDL0 507 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 LGALS8O00214 317 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 APOL3O95236 402 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 BAG2O95816 211 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 RBMY1DP0C7P1 496 aaKnown RBP11.49□□□□□ -0.57
PTCH1-217ENST00000548420 HOXA4Q00056 320 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF85Q03923 595 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 PRDX4Q13162 271 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ZSCAN26Q16670 478 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF841Q6ZN19 808 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 DCDC5Q6ZRR9 648 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ZNF826PQ6ZT77 177 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 ENTHD1Q8IYW4 607 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 OR8S1Q8NH09 359 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 HPSE2Q8WWQ2 592 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 STMN2Q93045 179 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 DACT3Q96B18 629 aaPredicted RBP11.49□□□□□ -0.57
PTCH1-217ENST00000548420 RDH12Q96NR8 316 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 C1orf123Q9NWV4 160 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 OR52A1Q9UKL2 312 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 SNX5Q9Y5X3 404 aa11.49□□□□□ -0.57
PTCH1-217ENST00000548420 TMEM210A6NLX4 147 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 ANXA2P2A6NMY6 339 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 DHRS7CA6NNS2 312 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 MPZL2O60487 215 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 DHRS3O75911 302 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 IGHV4-59P01825 116 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 KRT8P05787 483 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 CCL1P22362 96 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 ATP6V1E1P36543 226 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 GNALP38405 381 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 RIPPLY1Q0D2K3 151 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 KLHL22Q53GT1 634 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 TEX36Q5VZQ5 186 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 TMEM42Q69YG0 159 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 LYPD2Q6UXB3 125 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 WDR82Q6UXN9 313 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 PLEKHG7Q6ZR37 379 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 EGFL6Q8IUX8 553 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 OR10H4Q8NGA5 316 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 OR14K1Q8NGZ2 314 aa11.48□□□□□ -0.57
PTCH1-217ENST00000548420 CFHR4Q92496 578 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms