RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CARHSP1Q9Y2V2 147 aaKnown RBP11.48□□□□□ -0.57
PTCH1-212ENST00000546744 TOX3O15405 576 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-212ENST00000546744 DEDDO75618 318 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 HAAOP46952 286 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ERVFC1-1P60608 527 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 NTHL1P78549 312 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 OR5I1Q13606 314 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ARL6IP6Q8N6S5 226 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ABHD14BQ96IU4 210 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 RTL8AQ9BWD3 113 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 SIRT3Q9NTG7 399 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-212ENST00000546744 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 LRP12Q9Y561 859 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 TIMM10BQ9Y5J6 103 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 A6NDN8 102 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 H0YIG0 161 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 IGF2P01344 180 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ENPP1P22413 925 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 HLA-BQ31612 363 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 LAIR1Q6GTX8 287 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 C10orf35Q96D05 121 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 MRGPRX4Q96LA9 322 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 MMP25Q9NPA2 562 aa11.48□□□□□ -0.57
PTCH1-212ENST00000546744 ZFC3H1O60293 1989 aaKnown RBP11.47□□□□□ -0.57
PTCH1-212ENST00000546744 TERTO14746 1132 aaKnown RBP11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PLRG1O43660 514 aaKnown RBP11.47□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF737O75373 536 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 CYC1P08574 325 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PRR27Q6MZM9 219 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 LRP11Q86VZ4 500 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 FAM3CQ92520 227 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 ISOC2Q96AB3 205 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 SNX22Q96L94 193 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 OXGR1Q96P68 337 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 OBP2AQ9NY56 170 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 TMEM202A6NGA9 273 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PPM1DO15297 605 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 SLC31A2O15432 143 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 FGF17O60258 216 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 WISP3O95389 354 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-212ENST00000546744 SLC2A1P11166 492 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 MMP9P14780 707 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 HLA-GP17693 338 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PCP4P48539 62 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 RAC1P63000 192 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 NUP214P35658 2090 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-212ENST00000546744 FCN1O00602 326 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 MT-ND6P03923 174 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PGA4P0DJD7 388 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 PGA5P0DJD9 388 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 IL3RAP26951 378 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 MPV17LQ2QL34 196 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 LHX8Q68G74 356 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 ETV3LQ6ZN32 361 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 HSD17B8Q92506 261 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 HHIPQ96QV1 700 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 HDGFL3Q9Y3E1 203 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 LCTP09848 1927 aa11.47□□□□□ -0.57
PTCH1-212ENST00000546744 CST7O76096 145 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 HSPB1P04792 205 aaKnown RBP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 ACRP10323 421 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 OPRM1P35372 400 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 TNFRSF4P43489 277 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 MRPS21P82921 87 aaKnown RBP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 FAM53BQ14153 422 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 MRPL58Q14197 206 aaKnown RBP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF343Q6P1L6 599 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 MARCH3Q86UD3 253 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 H1FOOQ8IZA3 346 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 STARD4Q96DR4 205 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 PRF1P14222 555 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 OR2A1Q8NGT9 310 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 MRPL38Q96DV4 380 aaKnown RBP11.46□□□□□ -0.57
PTCH1-212ENST00000546744 ATP5SQ99766 215 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 OBP2BQ9NPH6 170 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 SLC45A2Q9UMX9 530 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 SLC17A4Q9Y2C5 497 aa11.46□□□□□ -0.57
PTCH1-212ENST00000546744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 FRG2CA6NGY1 282 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 DVL1O14640 695 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 HMGA1P17096 107 aaKnown RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 VDAC1P21796 283 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 CLEC18BQ6UXF7 455 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 NUFIP2Q7Z417 695 aaKnown RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 LRRC18Q8N456 261 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 OR2D3Q8NGH3 330 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 ADIPOR1Q96A54 375 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 CLCF1Q9UBD9 225 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 ZNF207O43670 478 aaKnown RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 CYB5R3P00387 301 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-212ENST00000546744 JMJD7P0C870 316 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 SLC25A6P12236 298 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 PMCHP20382 165 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 FUT7Q11130 342 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 GUCA2BQ16661 112 aa11.46□□□□□ -0.58
PTCH1-212ENST00000546744 OR11L1Q8NGX0 322 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms