RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 LDLRAD3Q86YD5 345 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 ZNF573Q86YE8 665 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 GID4Q8IVV7 300 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 SLC35F2Q8IXU6 374 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 TMEM163Q8TC26 289 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 OR51E1Q8TCB6 317 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 GAFA1Q96PS6 74 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 METTL8Q9H825 291 aaKnown RBP7.71□□□□□ -1.18
YBX3-218ENST00000546298 SIRT7Q9NRC8 400 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 CLN6Q9NWW5 311 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 FAM53CQ9NYF3 392 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 WARS2Q9UGM6 360 aaKnown RBP7.71□□□□□ -1.18
YBX3-218ENST00000546298 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.71□□□□□ -1.18
YBX3-218ENST00000546298 GTF2A1LQ9UNN4 478 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 COPS3Q9UNS2 423 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 PIGLQ9Y2B2 252 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 POLDIP2Q9Y2S7 368 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 AP4S1Q9Y587 144 aa7.71□□□□□ -1.18
YBX3-218ENST00000546298 TRBV23-1A0A0A0MS06 115 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 A0A0U1RQK1 487 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 A0A1B0GW55 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 A0A1W2PPH5 198 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 CLPSL1A2RUU4 121 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 ZAR1LA6NP61 321 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 M0R1W7 72 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DLGAP1O14490 977 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 MITFO75030 526 aaPredicted RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 RHBDL1O75783 438 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 PAHP00439 452 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 IGLV3-1P01715 115 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 TTRP02766 147 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 KRT8P05787 483 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L2P0CJ85 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L3P0CJ86 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L4P0CJ87 422 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L5P0CJ88 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L6P0CJ89 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L7P0CJ90 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 FAHP16930 419 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 ELF3P78545 371 aaPredicted RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 EFNB1P98172 346 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DGUOKQ16854 277 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 SMIM21Q3B7S5 101 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 BCL2L15Q5TBC7 163 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 AADACL4Q5VUY2 407 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 C1orf146Q5VVC0 180 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 OLFML2AQ68BL7 652 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 C12orf73Q69YU5 71 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 KDM4DQ6B0I6 523 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 HAGHLQ6PII5 290 aaPredicted RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4L9Q6RFH8 374 aaPredicted RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 PDZD9Q8IXQ8 264 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 ELMOD2Q8IZ81 293 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 FGFRL1Q8N441 504 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 TMEM185AQ8NFB2 350 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 AQP3Q92482 292 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 IL4I1Q96RQ9 567 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 APOL4Q9BPW4 351 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 OSBPL10Q9BXB5 764 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 FGF23Q9GZV9 251 aaPredicted RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 GABARAPL1Q9H0R8 117 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 C1RLQ9NZP8 487 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 DUX4Q9UBX2 424 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 OR52A1Q9UKL2 312 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 SF3B6Q9Y3B4 125 aaKnown RBP7.7□□□□□ -1.18
YBX3-218ENST00000546298 SNX5Q9Y5X3 404 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 R4GMQ9 66 aa7.7□□□□□ -1.18
YBX3-218ENST00000546298 IGKV1D-17A0A075B6S4 117 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 hCG_1809904A0A1W2PP81 198 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 A0A1W2PPE2 198 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 A0A1W2PR64 198 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 A0A1W2PRV1 198 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 DHRS7CA6NNS2 312 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 H0YAE9 185 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 SLC1A7O00341 560 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 NPFFO15130 113 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 GPR137BO60478 399 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 NOS1APO75052 506 aaPredicted RBP7.69□□□□□ -1.18
YBX3-218ENST00000546298 CIB2O75838 187 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 IGHV4-59P01825 116 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 OR2T7P0C7T2 308 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 PSG2P11465 335 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 SELLP14151 372 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 ATP6V1E1P36543 226 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 HAAOP46952 286 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 UBE2E1P51965 193 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 CAPZA1P52907 286 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 MFGE8Q08431 387 aaPredicted RBP7.69□□□□□ -1.18
YBX3-218ENST00000546298 ACSM1Q08AH1 577 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 TMED1Q13445 227 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 ACP7Q6ZNF0 438 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 BCDIN3DQ7Z5W3 292 aaKnown RBP7.69□□□□□ -1.18
YBX3-218ENST00000546298 YIPF7Q8N8F6 280 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 POC1AQ8NBT0 407 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 CCDC54Q8NEL0 328 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 OR5D13Q8NGL4 314 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 OR8J1Q8NGP2 316 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 OR2T27Q8NH04 317 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 OR5R1Q8NH85 324 aa7.69□□□□□ -1.18
YBX3-218ENST00000546298 DUS3LQ96G46 650 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms