RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 NPRL2Q8WTW4 380 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 DDIT4LQ96D03 193 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 PADI1Q9ULC6 663 aa12.48□□□□□ -0.41
SRP54-202ENST00000546080 XIRP2A4UGR9 3374 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 MED19A0JLT2 244 aaPredicted RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 METTL12A8MUP2 240 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 XRCC2O43543 280 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 CLRN1P58418 232 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 ARL6IP1Q15041 203 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 KISS1Q15726 138 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 TMEM240Q5SV17 173 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 GPR157Q5UAW9 335 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 RTL6Q6ICC9 239 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 TMEM182Q6ZP80 229 aaPredicted RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 C1QL2Q7Z5L3 287 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 SSC4DQ8WTU2 575 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 CHST5Q9GZS9 411 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 GAR1Q9NY12 217 aaKnown RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 C2orf72A6NCS6 295 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 DHRS7CA6NNS2 312 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 RRP8O43159 456 aaKnown RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 DIRAS3O95661 229 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 KLK3P07288 261 aaPredicted RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 GABREP78334 506 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 THEM4Q5T1C6 240 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 ZNF383Q8NA42 475 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 SNIP1Q8TAD8 396 aaKnown RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 ST8SIA1Q92185 356 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 MR1Q95460 341 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 MUCL1Q96DR8 90 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 SERINC1Q9NRX5 453 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 MMP24Q9Y5R2 645 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 PCNX3Q9H6A9 2034 aa12.47□□□□□ -0.41
SRP54-202ENST00000546080 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
SRP54-202ENST00000546080 IGHV5-51A0A0C4DH38 117 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 SPTY2D1-AS1A0A0U1RR47 76 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 A0A1B0GW64 132 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 ANKUB1A6NFN9 424 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 IFITM10A6NMD0 228 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 H3BML4 177 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 STMND1H3BQB6 276 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 SEMA4FO95754 770 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 THEGLP0DJG4 465 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 CCL1P22362 96 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 ANOS1P23352 680 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 LMO1P25800 156 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 ITGA3P26006 1051 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 CDAP32320 146 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 APOBEC1P41238 236 aaKnown RBP12.46□□□□□ -0.41
SRP54-202ENST00000546080 GFERP55789 205 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 PIGPP57054 158 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 SSTP61278 116 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 FZD2Q14332 565 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 PPA1Q15181 289 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 NSDHLQ15738 373 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 ZNF674Q2M3X9 581 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 PRSS58Q8IYP2 241 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 OR1N1Q8NGS0 311 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 HPSE2Q8WWQ2 592 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 ELL3Q9HB65 397 aaPredicted RBP12.46□□□□□ -0.41
SRP54-202ENST00000546080 PISDQ9UG56 409 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
SRP54-202ENST00000546080 VDAC3Q9Y277 283 aa12.46□□□□□ -0.41
SRP54-202ENST00000546080 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 FOSL1P15407 271 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 AFF3P51826 1226 aaKnown RBP12.46□□□□□ -0.42
SRP54-202ENST00000546080 EFNA3P52797 238 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 SP6Q3SY56 376 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 LRRC18Q8N456 261 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 OR14K1Q8NGZ2 314 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 STT3BQ8TCJ2 826 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 PHF3Q92576 2039 aaKnown RBP12.46□□□□□ -0.42
SRP54-202ENST00000546080 BADQ92934 168 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 TOMM40LQ969M1 308 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 RARRES2Q99969 163 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 MRPL13Q9BYD1 178 aaKnown RBP12.46□□□□□ -0.42
SRP54-202ENST00000546080 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 ALKBH4Q9NXW9 302 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 DOK5Q9P104 306 aa12.46□□□□□ -0.42
SRP54-202ENST00000546080 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 K7N7A8 449 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 RER1O15258 196 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 CA11O75493 328 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 OR5AC1P0C628 307 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 TMEM225BP0DP42 221 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 GABRR1P24046 479 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 ABCA11PQ4W5N1 156 aa12.45□□□□□ -0.42
SRP54-202ENST00000546080 ZNF574Q6ZN55 896 aaPredicted RBP12.45□□□□□ -0.42
SRP54-202ENST00000546080 C6orf201Q7Z4U5 140 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms