RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FABP1P07148 127 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 P2RY1P47900 373 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 LSM6P62312 80 aaKnown RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 GUK1Q16774 197 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 MIDNQ504T8 468 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 GGNBP1Q5YKI7 109 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 KMT5CQ86Y97 462 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 PLXDC1Q8IUK5 500 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 FAM219AQ8IW50 185 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 FOXRED2Q8IWF2 684 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 LRTM2Q8N967 370 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 LFNGQ8NES3 379 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 NFAM1Q8NET5 270 aaPredicted RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 PGAM5Q96HS1 289 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 S100A13Q99584 98 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 SCRT1Q9BWW7 348 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 CHST5Q9GZS9 411 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 CHRDQ9H2X0 955 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 SMDT1Q9H4I9 107 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 LMAN1LQ9HAT1 526 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 ATXN7L1Q9ULK2 861 aaPredicted RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 RER1O15258 196 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 EFNA2O43921 213 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 GPR137BO60478 399 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 IGHV2-5P01817 119 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 ZNF806P0C7X5 589 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 ZNF43P17038 809 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 LMO1P25800 156 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 CD27P26842 260 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 FKBP2P26885 142 aaKnown RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 CD38P28907 300 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 CDAP32320 146 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 RAB1AP62820 205 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 SLC38A9Q8NBW4 561 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 OR1J1Q8NGS3 322 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 NANPQ8TBE9 248 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 POC1BQ8TC44 478 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 HAS2Q92819 552 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 GALNT14Q96FL9 552 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 ZNF2Q9BSG1 426 aaPredicted RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 DUSP15Q9H1R2 295 aaPredicted RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 ZNF701Q9NV72 531 aaPredicted RBP7.68□□□□□ -1.18
TDP1-204ENST00000545686 KLRF1Q9NZS2 232 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 PADI1Q9ULC6 663 aa7.68□□□□□ -1.18
TDP1-204ENST00000545686 IGLV3-12A0A075B6K2 115 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 IGHV1OR21-1A0A087WYE8 117 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C2orf72A6NCS6 295 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 STMND1H3BQB6 276 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 LINC01387J3KSC0 135 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 TLX3O43711 291 aaPredicted RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 DUX1O43812 170 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ZNF14P17017 642 aaPredicted RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 RAB5AP20339 215 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 SERPINA2P20848 420 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 DTYMKP23919 212 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 MAS1LP35410 378 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 MFAP5Q13361 173 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 SMAD4Q13485 552 aaKnown RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 DEFB133Q30KQ1 61 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C1orf189Q5VU69 101 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 HIST2H3AQ71DI3 136 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 STT3BQ8TCJ2 826 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 MRPL24Q96A35 216 aaKnown RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 Q96M66 194 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 NAA11Q9BSU3 229 aaPredicted RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 PBDC1Q9BVG4 233 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 SUCNR1Q9BXA5 334 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ANXA10Q9UJ72 324 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 KCNIP3Q9Y2W7 256 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 LSM5Q9Y4Y9 91 aaKnown RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 B3GALT1Q9Y5Z6 326 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 GON4LQ3T8J9 2241 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 EML6Q6ZMW3 1958 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 DHRS7CA6NNS2 312 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 QDPRP09417 244 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 FOLR1P15328 257 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ACKR3P25106 362 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ID4P47928 161 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 STARD6P59095 220 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 HNRNPKP61978 463 aaKnown RBP eCLIP7.67□□□□□ -1.18
TDP1-204ENST00000545686 SLC35A1P78382 337 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 IL13RA2Q14627 380 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ETV3LQ6ZN32 361 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C16orf47Q6ZP98 133 aaPredicted RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 FOXL2NBQ6ZUU3 175 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C1QL2Q7Z5L3 287 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ANKRD37Q7Z713 158 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C1QL4Q86Z23 238 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 MAFIPQ8WZ33 124 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 ZNF501Q96CX3 271 aaPredicted RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 LYZL4Q96KX0 146 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 NAA60Q9H7X0 242 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 GSN-AS1Q9NRJ2 163 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 C19orf12Q9NSK7 152 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 MCTS1Q9ULC4 181 aaKnown RBP7.67□□□□□ -1.18
TDP1-204ENST00000545686 HSF4Q9ULV5 492 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 HDGFL3Q9Y3E1 203 aa7.67□□□□□ -1.18
TDP1-204ENST00000545686 AQP7P3A6NL99 342 aa7.66□□□□□ -1.18
TDP1-204ENST00000545686 ZNF726A6NNF4 738 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms