RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 MROQ9BYG7 248 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 TLNRD1Q9H1K6 362 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 ZMAT3Q9HA38 289 aaKnown RBP6.38□□□□□ -1.39
SNHG1-223ENST00000545440 RNPEPL1Q9HAU8 725 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 C1orf123Q9NWV4 160 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 FAM206AQ9NX38 181 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 NUP50Q9UKX7 468 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 MPC1Q9Y5U8 109 aa6.38□□□□□ -1.39
SNHG1-223ENST00000545440 KIR2DS1A0A191URI9 304 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM210A6NLX4 147 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 SRRM5B3KS81 715 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 MITFO75030 526 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF254O75437 659 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CST4P01036 141 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 AMY1AP04745 511 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 GRPP07492 148 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 MRPL3P09001 348 aaKnown RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 MUC1P15941 1255 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ACKR3P25106 362 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CD80P33681 288 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CFHR2P36980 270 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 EFNB1P98172 346 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CNN3Q15417 329 aaKnown RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 KLF17Q5JT82 389 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 SFRP4Q6FHJ7 346 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 LYPD2Q6UXB3 125 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 WDR82Q6UXN9 313 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF841Q6ZN19 808 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF826PQ6ZT77 177 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 C9orf139Q6ZV77 190 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ASRGL1Q7L266 308 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 KRT74Q7RTS7 529 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 KRT77Q7Z794 578 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 FAM90A1Q86YD7 464 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 GID4Q8IVV7 300 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF679Q8IYX0 411 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 GALNT4Q8N4A0 578 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 C19orf18Q8NEA5 215 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 OR1M1Q8NGA1 313 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM163Q8TC26 289 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 LRRC29Q8WV35 223 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 LRTOMTQ8WZ04 291 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 C12orf43Q96C57 262 aaKnown RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CENPNQ96H22 339 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 LYZL4Q96KX0 146 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 OR8B4Q96RC9 309 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CIB1Q99828 191 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 MICU1Q9BPX6 476 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 NUDT16L1Q9BRJ7 211 aaKnown RBP6.37□□□□□ -1.39
SNHG1-223ENST00000545440 RTL8AQ9BWD3 113 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 GABARAPL3Q9BY60 117 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 MOB1AQ9H8S9 216 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ADGRL4Q9HBW9 690 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 HAO2Q9NYQ3 351 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 ERVK-18Q9QC07 812 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 KAAG1Q9UBP8 84 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 CTSZQ9UBR2 303 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 RHBDD3Q9Y3P4 386 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 FBN3Q75N90 2809 aa6.37□□□□□ -1.39
SNHG1-223ENST00000545440 TRAV40A0A0B4J280 105 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF816-ZNF321PA0A0X1KG74 233 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 TMEM269A0A1B0GVZ9 245 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 PRR32B1ATL7 298 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 M0R129 80 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 TNFRSF13BO14836 293 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ADAM20O43506 726 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 IGLV3-1P01715 115 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 LIPFP07098 398 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ATP6V1B1P15313 513 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 EGR1P18146 543 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 EPHA2P29317 976 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 COMPP49747 757 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 RIDAP52758 137 aaKnown RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ACTG1P63261 375 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 CSNK2BP67870 215 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 HOXA4Q00056 320 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 PRDX4Q13162 271 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 HABP2Q14520 560 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 MICBQ29980 383 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 FAM76BQ5HYJ3 339 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 AADACL4Q5VUY2 407 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ZNF322Q6U7Q0 402 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 RBMS3Q6XE24 437 aaKnown RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 MEPCEQ7L2J0 689 aaKnown RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 AMIGO2Q86SJ2 522 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 C1QL4Q86Z23 238 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 C11orf53Q8IXP5 236 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 SLC35F2Q8IXU6 374 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ZDHHC23Q8IYP9 409 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 TCEANCQ8N8B7 351 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 ZDHHC22Q8N966 263 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 BOLLQ8N9W6 283 aaKnown RBP6.36□□□□□ -1.39
SNHG1-223ENST00000545440 OR10Z1Q8NGY1 313 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 FAM81AQ8TBF8 368 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 HPSE2Q8WWQ2 592 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 C22orf15Q8WYQ4 148 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 OR5P3Q8WZ94 311 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 TECTBQ96PL2 329 aa6.36□□□□□ -1.39
SNHG1-223ENST00000545440 PKP2Q99959 881 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms