RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	SLC41A3	Q96GZ6	507 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF583	Q96ND8	569 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	TSPAN32	Q96QS1	320 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	EPYC	Q99645	322 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	SLC35A5	Q9BS91	424 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	EMC6	Q9BV81	110 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	ULBP2	Q9BZM5	246 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	NMNAT2	Q9BZQ4	307 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	NANOG	Q9H9S0	305 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	CACYBP	Q9HB71	228 aa	Known RBP	4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	CENPM	Q9NSP4	180 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	THUMPD1	Q9NXG2	353 aa	Known RBP	4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	EIF3K	Q9UBQ5	218 aa	Known RBP	4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	OR5V1	Q9UGF6	321 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	BTNL2	Q9UIR0	455 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	KLHL21	Q9UJP4	597 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	CACNG2	Q9Y698	323 aa		4.99	□□□□□ -1.61
CPSF7-222	ENST00000544585	TRAV36DV7	A0A075B6V5	113 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585		A0A087WUJ7	227 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	IGLV9-49	A0A0B4J1Y8	123 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	KIR2DS1	A0A191URI9	304 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF732	B4DXR9	585 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	CHEK1	O14757	476 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	TM9SF1	O15321	606 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ATP6V0E1	O15342	81 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	PIN1P1	O15428	100 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	MFN2	O95140	757 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	IGHV1-46	P01743	117 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	MT-ND2	P03891	347 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	CD55	P08174	381 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	WNT2	P09544	360 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	PATE4	P0C8F1	98 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	PRG2	P13727	222 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	S100A3	P33764	101 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	APLNR	P35414	380 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	CSNK1A1	P48729	337 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	TTMP	Q5BVD1	217 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	VAX1	Q5SQQ9	334 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	C6orf89	Q6UWU4	347 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF836	Q6ZNA1	936 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF621	Q6ZSS3	439 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZER1	Q7Z7L7	766 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	VRK2	Q86Y07	508 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	LRRC34	Q8IZ02	419 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ICA1L	Q8NDH6	482 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	LINC01006	Q8NI28	216 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	SECTM1	Q8WVN6	248 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	DYRK2	Q92630	601 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	PLEKHA8	Q96JA3	519 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	MAGEB18	Q96M61	343 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	CCDC115	Q96NT0	180 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	TPPP3	Q9BW30	176 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	TMEM106B	Q9NUM4	274 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	GLTP	Q9NZD2	209 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	RRP15	Q9Y3B9	282 aa	Known RBP	4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	ETV7	Q9Y603	341 aa		4.98	□□□□□ -1.61
CPSF7-222	ENST00000544585	DOCK11	Q5JSL3	2073 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	SURF4	O15260	269 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	DFFB	O76075	338 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	IGHV4-38-2	P0DP08	117 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	CCL2	P13500	99 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	TUBG1	P23258	451 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	ALDH3A1	P30838	453 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	MDH2	P40926	338 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	KRTAP10-3	P60369	221 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	ERVS71-1	P61550	626 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	PUDP	Q08623	228 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	DEFB112	Q30KQ8	113 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	THEM4	Q5T1C6	240 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	KPRP	Q5T749	579 aa	Predicted RBP	4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	ULK3	Q6PHR2	472 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	SLC16A14	Q7RTX9	510 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF573	Q86YE8	665 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	OR52B4	Q8NGK2	314 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	OR6X1	Q8NH79	312 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	AGR3	Q8TD06	166 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	NTN5	Q8WTR8	489 aa	Predicted RBP	4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	TMEM54	Q969K7	222 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	BPIFA2	Q96DR5	249 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	PANX1	Q96RD7	426 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	SH3GL3	Q99963	347 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	RHOXF2	Q9BQY4	288 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	PARD6B	Q9BYG5	372 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	TMEM27	Q9HBJ8	222 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	TUBG2	Q9NRH3	451 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	TMEM38B	Q9NVV0	291 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	MRPL39	Q9NYK5	338 aa	Known RBP	4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	P2RX2	Q9UBL9	471 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	MIOX	Q9UGB7	285 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	LAMP5	Q9UJQ1	280 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	ZNF443	Q9Y2A4	671 aa	Predicted RBP	4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	BIRC6	Q9NR09	4857 aa		4.97	□□□□□ -1.61
CPSF7-222	ENST00000544585	IGHV3OR16-10	A0A075B7F0	116 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585	IGHV2-70D	A0A0C4DH43	119 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585		A0A1B0GWJ7	208 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585		H3BSA7	217 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585	PLPP3	O14495	311 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585	CDK2AP2	O75956	126 aa		4.96	□□□□□ -1.62
CPSF7-222	ENST00000544585	HPR	P00739	348 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms