RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FUT1P19526 365 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 PAX6P26367 422 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 ALDH3A1P30838 453 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RBM34P42696 430 aaKnown RBP3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CEBPDP49716 269 aaPredicted RBP3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RAB13P51153 203 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 ARHGDIBP52566 201 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SLC25A1P53007 311 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 OR12D2P58182 307 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SLC35B1P78383 322 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CDK6Q00534 326 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 IL18R1Q13478 541 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 FHL2Q14192 279 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RGNQ15493 299 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SSX2Q16385 188 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 ENTPD8Q5MY95 495 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 GCNT6Q5T4J0 391 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 STUMQ69YW2 141 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 REEP3Q6NUK4 255 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 MSANTD1Q6ZTZ1 278 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 TRMT10CQ7L0Y3 403 aaKnown RBP3.22□□□□□ -1.89
SNHG1-220ENST00000544550 DPY19L4Q7Z388 723 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 AMIGO2Q86SJ2 522 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 DHDDSQ86SQ9 333 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CALHM1Q8IU99 346 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 ZNF695Q8IW36 515 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 MKXQ8IYA7 352 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 FAM185AQ8N0U4 392 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 FGFRL1Q8N441 504 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 KLHL30-AS1Q8NEE0 82 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 GJC3Q8NFK1 279 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 OR13D1Q8NGV5 346 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 OR4Q3Q8NH05 313 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 OR8S1Q8NH09 359 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 CHPT1Q8WUD6 406 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 LIPHQ8WWY8 451 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SLC7A6Q92536 515 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 MAL2Q969L2 176 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SLCO4A1Q96BD0 722 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SGTBQ96EQ0 304 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RNFT2Q96EX2 444 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 ITCHQ96J02 903 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 RITA1Q96K30 269 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 NUAK2Q9H093 628 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 OPA3Q9H6K4 179 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 WDR76Q9H967 626 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 VNN3Q9NY84 501 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 USE1Q9NZ43 259 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 SLC7A7Q9UM01 511 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 POLR1DQ9Y2S0 133 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 DMRT1Q9Y5R6 373 aa3.22□□□□□ -1.89
SNHG1-220ENST00000544550 TEX13CA0A0J9YWL9 993 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 GGT3PA6NGU5 568 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 CPSF4LA6NMK7 179 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ANKRD30BLA7E2S9 258 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 FAM90A22PA8MWA6 464 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 XKRYO14609 159 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 RRHO14718 337 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 RER1O15258 196 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 RIPK2O43353 540 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 TPST1O60507 370 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 TPST2O60704 377 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 PROP1O75360 226 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 OR7A10O76100 309 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 LCATP04180 440 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ARG1P05089 322 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ALDOCP09972 364 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 PPIBP23284 216 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 COX7A1P24310 79 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 BRS3P32247 399 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 DDOSTP39656 456 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 OR3A4PP47883 348 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 NME5P56597 212 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 UFM1P61960 85 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 SLC34A1Q06495 639 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ALKBH1Q13686 389 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 KPNB1Q14974 876 aaKnown RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 SEC23BQ15437 767 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 SNCBQ16143 134 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 DGUOKQ16854 277 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF260Q3ZCT1 412 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ANKDD1AQ495B1 522 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ABCA11PQ4W5N1 156 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 CCDC92Q53HC0 331 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 C6orf10Q5SRN2 563 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 MINOS1Q5TGZ0 78 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF770Q6IQ21 691 aaPredicted RBP3.21□□□□□ -1.9
SNHG1-220ENST00000544550 WDR82Q6UXN9 313 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF788Q6ZQV5 615 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF826PQ6ZT77 177 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 KRT77Q7Z794 578 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 LHFPL4Q7Z7J7 247 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ZNF429Q86V71 674 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 CYB561A3Q8NBI2 242 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 MOSPD2Q8NHP6 518 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 NFKBIDQ8NI38 313 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 IFT81Q8WYA0 676 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 PPP1R36Q96LQ0 422 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 ATF6BQ99941 703 aa3.21□□□□□ -1.9
SNHG1-220ENST00000544550 POLR2J2Q9GZM3 115 aaKnown RBP3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms