RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 BTNL3Q6UXE8 466 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 CCDC190Q86UF4 302 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 ABHD14AQ9BUJ0 271 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 MAP1LC3BQ9GZQ8 125 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 PRR13Q9NZ81 148 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 ABI3BPQ7Z7G0 1075 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 ETFBKMTQ8IXQ9 262 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 ERRFI1Q9UJM3 462 aaPredicted RBP13.85□□□□□ -0.19
CHD4-210ENST00000544040 MYH9P35579 1960 aaKnown RBP13.85□□□□□ -0.19
CHD4-210ENST00000544040 FRG2CA6NGY1 282 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 PLRG1O43660 514 aaKnown RBP13.85□□□□□ -0.19
CHD4-210ENST00000544040 NPY1RP25929 384 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 PPP2CBP62714 309 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 PPP2CAP67775 309 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 SLC17A2O00624 439 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 TPBGQ13641 420 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 VMA21Q3ZAQ7 101 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 RFESDQ8TAC1 157 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 R3HDMLQ9H3Y0 253 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 TNFRSF19Q9NS68 423 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 BET1LQ9NYM9 111 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 PSG11Q9UQ72 335 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 CROCCQ5TZA2 2017 aa13.85□□□□□ -0.19
CHD4-210ENST00000544040 HSPB2A8KAH6 182 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 CLDN34H7C241 214 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SPINK2P20155 84 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 CD40P25942 277 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 HSPB2Q16082 182 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 FNDC7Q5VTL7 733 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 ABLIM3O94929 683 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 G6PCP35575 357 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 CD96P40200 585 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 RHOBP62745 196 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 CAMKMTQ7Z624 323 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 ZNF576Q9H609 170 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 ARRDC5A6NEK1 342 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 TNFRSF10CO14798 259 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 NAT1P18440 290 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SULT1A1P50225 295 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SEZ6L2Q6UXD5 910 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 MS4A4AQ96JQ5 239 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 HSD17B10Q99714 261 aaKnown RBP13.84□□□□□ -0.19
CHD4-210ENST00000544040 H0YIG0 161 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 J3KRW8 73 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 IGHA1P01876 353 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 IGHA2P01877 340 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 FAM87AP0C7U9 286 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 IGFBP6P24592 240 aaPredicted RBP13.84□□□□□ -0.19
CHD4-210ENST00000544040 TCL1AP56279 114 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SPCS3P61009 180 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 LRRC10Q5BKY1 277 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 LYG1Q8N1E2 194 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 FBXL6Q8N531 539 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 KISS1RQ969F8 398 aaPredicted RBP13.84□□□□□ -0.19
CHD4-210ENST00000544040 A0A087WUJ7 227 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 C3orf85A0A1B0GTC6 90 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 NDUFB3O43676 98 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 NDUFB6O95139 128 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 LY86O95711 162 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 ACAA2P42765 397 aaKnown RBP13.84□□□□□ -0.19
CHD4-210ENST00000544040 TCTAP57738 103 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SSBP1Q04837 148 aaKnown RBP13.84□□□□□ -0.19
CHD4-210ENST00000544040 SLC35B3Q9H1N7 401 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 SRD5A3Q9H8P0 318 aa13.84□□□□□ -0.19
CHD4-210ENST00000544040 C9orf170A2RU37 121 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 ARG1P05089 322 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 FMODQ06828 376 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 Q3ZCU0 254 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 C6orf201Q7Z4U5 140 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 SPPL3Q8TCT6 385 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 LOXL2Q9Y4K0 774 aa13.83□□□□□ -0.19
CHD4-210ENST00000544040 SHISA7A6NL88 538 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ZNF716A6NP11 495 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 OTOSQ8NHW6 89 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ASB13Q8WXK3 278 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 BCL2L10Q9HD36 194 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 TNFSF15O95150 251 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 FUT3P21217 361 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ZNF260Q3ZCT1 412 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ZNF628Q5EBL2 1059 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 SIGIRRQ6IA17 410 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 OR1F12Q8NHA8 337 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 SARAFQ96BY9 339 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 PHYHIPLQ96FC7 376 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 SFT2D2O95562 160 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ORM2P19652 201 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 OR3A4PP47883 348 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 WDR38Q5JTN6 314 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 CALHM3Q86XJ0 350 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 CYB5R1Q9UHQ9 305 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 PRSS1P07477 247 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 POU2F2P09086 479 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 CEBPDP49716 269 aaPredicted RBP13.83□□□□□ -0.2
CHD4-210ENST00000544040 OR2V1Q8NHB1 315 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 CNRIP1Q96F85 164 aaPredicted RBP13.83□□□□□ -0.2
CHD4-210ENST00000544040 FOXB1Q99853 325 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 KCNK15Q9H427 330 aa13.83□□□□□ -0.2
CHD4-210ENST00000544040 A0A1B0GTH9 108 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms