RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PDZK1IP1Q13113 114 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 TATDN3Q17R31 274 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 PLAC9Q5JTB6 97 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 SFRP4Q6FHJ7 346 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-218ENST00000543939 RTN4RL2Q86UN3 420 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 ZDHHC23Q8IYP9 409 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 PXT1Q8NFP0 134 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 OR51T1Q8NGJ9 327 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 HPSE2Q8WWQ2 592 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 RAB3CQ96E17 227 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 FGF23Q9GZV9 251 aaPredicted RBP17.05■□□□□ 0.32
COPS7A-218ENST00000543939 AMDHD2Q9Y303 409 aa17.05■□□□□ 0.32
COPS7A-218ENST00000543939 PIEZO2Q9H5I5 2752 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 GSTP1P09211 210 aaKnown RBP17.04■□□□□ 0.32
COPS7A-218ENST00000543939 HIST1H1DP16402 221 aaKnown RBP17.04■□□□□ 0.32
COPS7A-218ENST00000543939 CEACAM21Q3KPI0 293 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 FJX1Q86VR8 437 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 FAM169BQ8N8A8 192 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 NUDT15Q9NV35 164 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF107Q9UII5 783 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-218ENST00000543939 SLC25A15Q9Y619 301 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 IGKV1-12A0A0C4DH73 117 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 PLATP00750 562 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 IGKV1D-12P01611 117 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF35P13682 527 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 GTF2F2P13984 249 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 IL32P24001 234 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 FAUP35544 74 aaKnown RBP17.04■□□□□ 0.32
COPS7A-218ENST00000543939 UCP2P55851 309 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 RSU1Q15404 277 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 SPATA46Q5T0L3 261 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 FAAP20Q6NZ36 180 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 TMEM229BQ8NBD8 167 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 OR4C16Q8NGL9 310 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 IL36GQ9NZH8 169 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF629Q9UEG4 869 aaPredicted RBP17.04■□□□□ 0.32
COPS7A-218ENST00000543939 KCNK7Q9Y2U2 307 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 PRR14LQ5THK1 2151 aa17.04■□□□□ 0.32
COPS7A-218ENST00000543939 TRAV6A0A075B6T7 132 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 BOLA2-SMG1P6H3BVE0 249 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 MFNGO00587 321 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 MSTNO14793 375 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 LILRA1O75019 489 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 HTR3BO95264 441 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 CECR9P0C854 216 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 AKAIN1P0CW23 69 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 CPT2P23786 658 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 OPRM1P35372 400 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 OR2T2Q6IF00 324 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 HPS1Q92902 700 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 Q96M66 194 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.03■□□□□ 0.32
COPS7A-218ENST00000543939 MCUBQ9NWR8 336 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 TINAGQ9UJW2 476 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 MPC1Q9Y5U8 109 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 ALG5Q9Y673 324 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 PIEZO1Q92508 2521 aa17.03■□□□□ 0.32
COPS7A-218ENST00000543939 ANKRD30BLA7E2S9 258 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 ZNF780AO75290 641 aaPredicted RBP17.02■□□□□ 0.32
COPS7A-218ENST00000543939 CD3DP04234 171 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 PSMB1P20618 241 aaKnown RBP17.02■□□□□ 0.32
COPS7A-218ENST00000543939 HLA-DMAP28067 261 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 RAB25P57735 213 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 TAS2R19P59542 299 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 PNLIPRP3Q17RR3 467 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 TRAPPC6BQ86SZ2 158 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 AKAP14Q86UN6 197 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 CALHM1Q8IU99 346 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 ZSCAN4Q8NAM6 433 aaPredicted RBP17.02■□□□□ 0.32
COPS7A-218ENST00000543939 BHLHE23Q8NDY6 225 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 OR5A2Q8NGI9 324 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 NUDCD2Q8WVJ2 157 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 CCDC120Q96HB5 630 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 ARHGAP5-AS1Q96IT6 56 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 OR2J1Q9GZK6 312 aa17.02■□□□□ 0.32
COPS7A-218ENST00000543939 A0A0G2JNJ9 132 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 A8MXE2 369 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 SSX5O60225 188 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 CSTBP04080 98 aaKnown RBP17.01■□□□□ 0.31
COPS7A-218ENST00000543939 FCER2P06734 321 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 RCVRNP35243 200 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 RAG2P55895 527 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 ERVS71-1P61550 626 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 TIMM23BQ5SRD1 257 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 STEAP1BQ6NZ63 245 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 OR4D10Q8NGI6 311 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 OR1J1Q8NGS3 322 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 SLC25A40Q8TBP6 338 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 OR5P3Q8WZ94 311 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 DVL3Q92997 716 aaPredicted RBP17.01■□□□□ 0.31
COPS7A-218ENST00000543939 PIGMQ9H3S5 423 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 Q9UFV3 132 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 MAP1BP46821 2468 aaKnown RBP17.01■□□□□ 0.31
COPS7A-218ENST00000543939 IGHV1-18A0A0C4DH31 117 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 HMX3A6NHT5 357 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 DHFRP00374 187 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 H2AFB2P0C5Z0 115 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 TRAPPC2P0DI81 140 aa17.01■□□□□ 0.31
COPS7A-218ENST00000543939 TRAPPC2BP0DI82 140 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms