RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 SAMD4BQ5PRF9 694 aaKnown RBP16.12■□□□□ 0.17
LPCAT3-211ENST00000543794 TCF19Q9Y242 345 aa16.12■□□□□ 0.17
LPCAT3-211ENST00000543794 A6NDX4 124 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 MTRF1O75570 445 aaKnown RBP16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 MPIG6BO95866 241 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 MSX2P35548 267 aaPredicted RBP16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 RAB13P51153 203 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 CAPZA1P52907 286 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 ERVFRD-1P60508 538 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 LHFPL4Q7Z7J7 247 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 DYNAPQ8N1N2 210 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 RASL12Q9NYN1 266 aa16.11■□□□□ 0.17
LPCAT3-211ENST00000543794 hCG_1809904A0A1W2PP81 198 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 A0A1W2PPE2 198 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 A0A1W2PR64 198 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 A0A1W2PRV1 198 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 RFPL4AA6NLU0 287 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 RIIAD1A6NNX1 92 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 RFPL4AL1F8VTS6 287 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 IGLL1P15814 213 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 H2AFXP16104 143 aaPredicted RBP16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 ZNF3P17036 446 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 COX7A1P24310 79 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 CEACAM21Q3KPI0 293 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 CD177Q8N6Q3 437 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 AQP3Q92482 292 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 PRSS22Q9GZN4 317 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 MYLK2Q9H1R3 596 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 MED20Q9H944 212 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 CMC2Q9NRP2 79 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 ARMC1Q9NVT9 282 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 USE1Q9NZ43 259 aa16.1■□□□□ 0.17
LPCAT3-211ENST00000543794 K7EIL1 84 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 ARPC2O15144 300 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 CCNB2O95067 398 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 SOX14O95416 240 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 CCL3L1P16619 93 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 CD33P20138 364 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 PRDX6P30041 224 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 ACP7Q6ZNF0 438 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 ZNF561Q8N587 486 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 AQP11Q8NBQ7 271 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 OR8B12Q8NGG6 310 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 OR5A2Q8NGI9 324 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 OTOSQ8NHW6 89 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 MALSU1Q96EH3 234 aa16.09■□□□□ 0.17
LPCAT3-211ENST00000543794 FAM183AA6NL82 134 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 PEX14O75381 377 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 LYNP07948 512 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 PRDX2P32119 198 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 CD83Q01151 205 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 PLA1AQ53H76 456 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 CEP78Q5JTW2 689 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 Q6ZS46 218 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 TMEM219Q86XT9 240 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 CALHM1Q8IU99 346 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 ZNF454Q8N9F8 522 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 OR4M1Q8NGD0 313 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 OR2T27Q8NH04 317 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 RPS4Y2Q8TD47 263 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 THEM6Q8WUY1 208 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 ITFG2Q969R8 447 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 OR5M11Q96RB7 305 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 ABCB10Q9NRK6 738 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 ARGLU1Q9NWB6 273 aaPredicted RBP16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 PITPNC1Q9UKF7 332 aa16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 TBL2Q9Y4P3 447 aaKnown RBP16.08■□□□□ 0.16
LPCAT3-211ENST00000543794 COL7A1Q02388 2944 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 OR5B21A6NL26 309 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 MAP2K3P46734 347 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 PSMA6P60900 246 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 BLCAPP62952 87 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 PPP1R8Q12972 351 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 ZNF273Q14593 569 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 HAGHLQ6PII5 290 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 FOXRED1Q96CU9 486 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 NIPAL2Q9H841 368 aa16.07■□□□□ 0.16
LPCAT3-211ENST00000543794 C17orf98A8MV24 154 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 SLC1A7O00341 560 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 VSIG8P0DPA2 414 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 DYNLT3P51808 116 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 DLX6P56179 175 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 SSX2Q16385 188 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 SMIM21Q3B7S5 101 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 DMRTC1Q5HYR2 192 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 LDLRAD2Q5SZI1 272 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 ZNF782Q6ZMW2 699 aaPredicted RBP16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 POC1AQ8NBT0 407 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 FAM81AQ8TBF8 368 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 OTULINQ96BN8 352 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 OCSTAMPQ9BR26 566 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 OR51V1Q9H2C8 321 aa16.06■□□□□ 0.16
LPCAT3-211ENST00000543794 A0A0U1RQV5 110 aa16.05■□□□□ 0.16
LPCAT3-211ENST00000543794 ODF3BA8MYP8 253 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms