RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 CD200R1LQ6Q8B3 271 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 CEACAM19Q7Z692 300 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 MOGAT3Q86VF5 341 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 ZNF525Q8N782 197 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 OR13C9Q8NGT0 318 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 DVL3Q92997 716 aaPredicted RBP10.28□□□□□ -0.76
DDX55-210ENST00000543016 YIPF5Q969M3 257 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 SLITRK2Q9H156 845 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 RHOFQ9HBH0 211 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 CREBBPQ92793 2442 aa10.28□□□□□ -0.76
DDX55-210ENST00000543016 PRRC2AP48634 2157 aaKnown RBP10.28□□□□□ -0.76
DDX55-210ENST00000543016 TACC2O95359 2948 aa10.27□□□□□ -0.76
DDX55-210ENST00000543016 IGKV1-9A0A0C4DH69 117 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 FAM230AA0A1W2PPH8 454 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 J3QT63 122 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 NOS1APO75052 506 aaPredicted RBP10.27□□□□□ -0.77
DDX55-210ENST00000543016 LY6HO94772 140 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 CYB5AP00167 134 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 UCHL1P09936 223 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 BDKRB2P30411 391 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 GPR6P46095 362 aaPredicted RBP10.27□□□□□ -0.77
DDX55-210ENST00000543016 HAAOP46952 286 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 PSMD7P51665 324 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 IL24Q13007 206 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 MPPED2Q15777 294 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 CARTPTQ16568 116 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 HSD17B12Q53GQ0 312 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 SPRNQ5BIV9 151 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 PRAMEF6Q5VXH4 476 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 WDR86Q86TI4 376 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 C11orf53Q8IXP5 236 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 SAXO1Q8IYX7 474 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 MUC20Q8N307 709 aaPredicted RBP10.27□□□□□ -0.77
DDX55-210ENST00000543016 NKAIN3Q8N8D7 197 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 ZSCAN4Q8NAM6 433 aaPredicted RBP10.27□□□□□ -0.77
DDX55-210ENST00000543016 SCCPDHQ8NBX0 429 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 OR13C5Q8NGS8 318 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 TMEM203Q969S6 136 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 PPP1R3EQ9H7J1 279 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 TCF7L1Q9HCS4 588 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 NOX4Q9NPH5 578 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 UFSP2Q9NUQ7 469 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 C1orf123Q9NWV4 160 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 RASL12Q9NYN1 266 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 TAS2R4Q9NYW5 299 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 NPTNQ9Y639 398 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 SETXQ7Z333 2677 aaKnown RBP10.27□□□□□ -0.77
DDX55-210ENST00000543016 MYO9AB2RTY4 2548 aa10.27□□□□□ -0.77
DDX55-210ENST00000543016 hCG_1807616A0A1W2PRN6 198 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 VWC2LB2RUY7 222 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 GABRPO00591 440 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 CDIPTO14735 213 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 PIN1P1O15428 100 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 PPIHO43447 177 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 NDUFA2O43678 99 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 LHBP01229 141 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 HCKP08631 526 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 SRMP19623 302 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 FGF9P31371 208 aaPredicted RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 PMELP40967 661 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 NR4A2P43354 598 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 GP2P55259 537 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 RPS25P62851 125 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 TMEM155Q4W5P6 130 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 HAGHLQ6PII5 290 aaPredicted RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 WDR82Q6UXN9 313 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 SPNS3Q6ZMD2 512 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 TMEM91Q6ZNR0 172 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 FAM90A1Q86YD7 464 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 KRTAP1-3Q8IUG1 177 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 MKXQ8IYA7 352 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 Q8IYB0 196 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 PNLDC1Q8NA58 520 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 AQP3Q92482 292 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 RPL3LQ92901 407 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 C12orf43Q96C57 262 aaKnown RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 FOXRED1Q96CU9 486 aaPredicted RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 FGF23Q9GZV9 251 aaPredicted RBP10.26□□□□□ -0.77
DDX55-210ENST00000543016 SNTG1Q9NSN8 517 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 ITGB1BP2Q9UKP3 347 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 STUB1Q9UNE7 303 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 SSR3Q9UNL2 185 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 GSTK1Q9Y2Q3 226 aa10.26□□□□□ -0.77
DDX55-210ENST00000543016 CHD3Q12873 2000 aaKnown RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 PPIAL4EA0A075B759 164 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 TRAV1-2A0A0B4J238 106 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 TRAV38-1A0A0B4J264 116 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 SRRM5B3KS81 715 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PPIAL4DF5H284 164 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 LYNX1G3V0Z9 82 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 LGALS8O00214 317 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 HEXAP06865 529 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 PPIAL4FP0DN26 164 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 LYNX1P0DP58 116 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 MUC1P15941 1255 aaPredicted RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 CD36P16671 472 aa10.25□□□□□ -0.77
DDX55-210ENST00000543016 MDH2P40926 338 aaKnown RBP10.25□□□□□ -0.77
DDX55-210ENST00000543016 BMXP51813 675 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms