RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 OR10K1Q8NGX5 313 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 GTF3AQ92664 365 aaKnown RBP11.32□□□□□ -0.6
CHFR-221ENST00000542714 FAM46BQ96A09 425 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 CPNE2Q96FN4 548 aaPredicted RBP11.32□□□□□ -0.6
CHFR-221ENST00000542714 S100A16Q96FQ6 103 aaKnown RBP11.32□□□□□ -0.6
CHFR-221ENST00000542714 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 LPAR5Q9H1C0 372 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 ATG5Q9H1Y0 275 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 ABCB10Q9NRK6 738 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 C14orf119Q9NWQ9 140 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 RAB22AQ9UL26 194 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 ING4Q9UNL4 249 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
CHFR-221ENST00000542714 IGLV3-9A0A075B6K5 115 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 OR5B21A6NL26 309 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 MLNRO43193 412 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 SIAH2O43255 324 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 TIMM8AO60220 97 aaPredicted RBP11.31□□□□□ -0.6
CHFR-221ENST00000542714 HLA-DQB1P01920 261 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 TMEM225BP0DP42 221 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 AGAP20933 346 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 TAS2R20P59543 309 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 ZNF181Q2M3W8 571 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 SLC22A6Q4U2R8 563 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 STEAP3Q658P3 488 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 PYHIN1Q6K0P9 492 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 VHLLQ6RSH7 139 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 RTN4RL2Q86UN3 420 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 LYSMD2Q8IV50 215 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 DMRTC2Q8IXT2 367 aaPredicted RBP11.31□□□□□ -0.6
CHFR-221ENST00000542714 KCNG3Q8TAE7 436 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 RNF170Q96K19 258 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 GAL3ST1Q99999 423 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 NICN1Q9BSH3 213 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 ADAT1Q9BUB4 502 aaKnown RBP11.31□□□□□ -0.6
CHFR-221ENST00000542714 BANF2Q9H503 90 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
CHFR-221ENST00000542714 CHD3Q12873 2000 aaKnown RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 SHISA9B4DS77 424 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 RAB27BO00194 218 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 XRCC3O43542 346 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 LANCL1O43813 399 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 CRTAPO75718 401 aaPredicted RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 CLDN14O95500 239 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 MPIG6BO95866 241 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 IGHV3-13P01766 116 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 PTHLHP12272 177 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 IL7P13232 177 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 LOXP28300 417 aaPredicted RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 RPS23P62266 143 aaKnown RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 GNG3P63215 75 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 DGCR2P98153 550 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 OR8H2Q8N162 312 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 ZNF611Q8N823 705 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 ACBD4Q8NC06 268 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 PXT1Q8NFP0 134 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 GCDHQ92947 438 aaPredicted RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 LRRC46Q96FV0 321 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 PLPPR2Q96GM1 343 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 CYYR1Q96J86 154 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 HIST1H2AAQ96QV6 131 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 MRPL37Q9BZE1 423 aaKnown RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 OR51I2Q9H344 312 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 NGBQ9NPG2 151 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 IL36GQ9NZH8 169 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 NDRG3Q9UGV2 375 aa11.3□□□□□ -0.6
CHFR-221ENST00000542714 MRPS7Q9Y2R9 242 aaKnown RBP11.3□□□□□ -0.6
CHFR-221ENST00000542714 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
CHFR-221ENST00000542714 A0A1W2PQ09 198 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 ZSCAN5BA6NJL1 495 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 FOXI3A8MTJ6 420 aaPredicted RBP11.29□□□□□ -0.6
CHFR-221ENST00000542714 CTDSPLO15194 276 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 SYNGR1O43759 233 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 TPPPO94811 219 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 MGMTP16455 207 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 SERPINA2P20848 420 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 RANBP1P43487 201 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 HAAOP46952 286 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 KLF3P57682 345 aaPredicted RBP11.29□□□□□ -0.6
CHFR-221ENST00000542714 OR8G1Q15617 311 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 ADAM5Q6NVV9 412 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 SLC22A25Q6T423 547 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 CDH24Q86UP0 819 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 SAXO1Q8IYX7 474 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 Q8N402 240 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 ZSCAN4Q8NAM6 433 aaPredicted RBP11.29□□□□□ -0.6
CHFR-221ENST00000542714 OR10AD1Q8NGE0 317 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 YIPF5Q969M3 257 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 TRIM63Q969Q1 353 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 MRPL24Q96A35 216 aaKnown RBP11.29□□□□□ -0.6
CHFR-221ENST00000542714 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 TM2D1Q9BX74 207 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 TMEM59Q9BXS4 323 aa11.29□□□□□ -0.6
CHFR-221ENST00000542714 METTL9Q9H1A3 318 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms