RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 RBP2P50120 134 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 Q6ZS92 163 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 C6orf201Q7Z4U5 140 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 SPSB1Q96BD6 273 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 SARAFQ96BY9 339 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 S100A13Q99584 98 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 CST11Q9H112 138 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 NPDC1Q9NQX5 325 aaPredicted RBP14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 SPTA1P02549 2419 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 ZNF816-ZNF321PA0A0X1KG74 233 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 PMP2P02689 132 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 CD74P04233 296 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 CHRM2P08172 466 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 UBBP0CG47 229 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 TAF9Q16594 264 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 SIGIRRQ6IA17 410 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 SLC36A1Q7Z2H8 476 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 BPIFB2Q8N4F0 458 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 OR13C8Q8NGS7 320 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 WBP1Q96G27 269 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 HDHD3Q9BSH5 251 aaPredicted RBP14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 PAPOLGQ9BWT3 736 aaKnown RBP14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 ING3Q9NXR8 418 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 ATPIF1Q9UII2 106 aa14.88□□□□□ -0.03
TMEM50B-210ENST00000542230 CADP27708 2225 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 OR14I1A6ND48 311 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 GNG2P59768 71 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 SSBP1Q04837 148 aaKnown RBP14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 PLP2Q04941 152 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 PIGYQ3MUY2 71 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 TMEM53Q6P2H8 277 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 CCDC54Q8NEL0 328 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 OR56B1Q8NGI3 324 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 FBXW5Q969U6 566 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 URM1Q9BTM9 101 aaKnown RBP14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 GP6Q9HCN6 339 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 CA10Q9NS85 328 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 ZNF69Q9UC07 566 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 A0A1B0GUH1 482 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 MSTNO14793 375 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 TOXO94900 526 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 AGFG2O95081 481 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 IL32P24001 234 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 CNN3Q15417 329 aaKnown RBP14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 SF3B4Q15427 424 aaKnown RBP eCLIP14.87□□□□□ -0.032e-8■■■□□ 14.8
TMEM50B-210ENST00000542230 C2orf68Q2NKX9 166 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 NKAPLQ5M9Q1 402 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 CD276Q5ZPR3 534 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 SLC30A7Q8NEW0 376 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 APOBEC3DQ96AK3 386 aaPredicted RBP14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 CCDC120Q96HB5 630 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
TMEM50B-210ENST00000542230 NCOR2Q9Y618 2525 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 SULT1A3P0DMM9 295 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 SULT1A4P0DMN0 295 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 COX5BP10606 129 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 NPBWR2P48146 333 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 IDH3GP51553 393 aaPredicted RBP14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 ERVS71-1P61550 626 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 MRPS15P82914 257 aaKnown RBP14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 MAB21L1Q13394 359 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 RSU1Q15404 277 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 HPSE2Q8WWQ2 592 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 DYRK2Q92630 601 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 ABHD17AQ96GS6 310 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 PECRQ9BY49 303 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 MOV10Q9HCE1 1003 aaKnown RBP14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 IFT46Q9NQC8 304 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 ZNF391Q9UJN7 358 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 ESPL1Q14674 2120 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 ZGRF1Q86YA3 2104 aa14.86□□□□□ -0.03
TMEM50B-210ENST00000542230 SERPINA5P05154 406 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 PRKACBP22694 351 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 APLNRP35414 380 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 CXADRP78310 365 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 PRDX4Q13162 271 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 MRPL21Q7Z2W9 205 aaKnown RBP14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 TMED4Q7Z7H5 227 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 SPACA3Q8IXA5 215 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 OR11H4Q8NGC9 324 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 Q96M66 194 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 ST6GALNAC5Q9BVH7 336 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 OPN3Q9H1Y3 402 aaPredicted RBP14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 KCNN3Q9UGI6 736 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 ATRXP46100 2492 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 F8VVB4 439 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 F8VWA3 439 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 AKR7A2O43488 359 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 TNFSF13O75888 250 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 ZNF14P17017 642 aaPredicted RBP14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 GZMKP49863 264 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 GPM6AP51674 278 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 SNRPD2P62316 118 aaKnown RBP14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 PDZK1IP1Q13113 114 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 ARFRP1Q13795 201 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 GABRA6Q16445 453 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 MICBQ29980 383 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 RTL6Q6ICC9 239 aa14.85□□□□□ -0.03
TMEM50B-210ENST00000542230 SEZ6L2Q6UXD5 910 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms