RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SAMD4BQ5PRF9 694 aaKnown RBP16.12■□□□□ 0.17
LPCAT3-210ENST00000540090 TCF19Q9Y242 345 aa16.12■□□□□ 0.17
LPCAT3-210ENST00000540090 A6NDX4 124 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 MTRF1O75570 445 aaKnown RBP16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 MPIG6BO95866 241 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 MSX2P35548 267 aaPredicted RBP16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 RAB13P51153 203 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 CAPZA1P52907 286 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 ERVFRD-1P60508 538 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 THAP5Q7Z6K1 395 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 LHFPL4Q7Z7J7 247 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 DYNAPQ8N1N2 210 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 RASL12Q9NYN1 266 aa16.11■□□□□ 0.17
LPCAT3-210ENST00000540090 hCG_1809904A0A1W2PP81 198 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 A0A1W2PPE2 198 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 A0A1W2PR64 198 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 A0A1W2PRV1 198 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 RFPL4AA6NLU0 287 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 RIIAD1A6NNX1 92 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 RFPL4AL1F8VTS6 287 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 IGLL1P15814 213 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 H2AFXP16104 143 aaPredicted RBP16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 ZNF3P17036 446 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 COX7A1P24310 79 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 CEACAM21Q3KPI0 293 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 CD177Q8N6Q3 437 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 AQP3Q92482 292 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 PRSS22Q9GZN4 317 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 MYLK2Q9H1R3 596 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 MED20Q9H944 212 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 CMC2Q9NRP2 79 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 ARMC1Q9NVT9 282 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 USE1Q9NZ43 259 aa16.1■□□□□ 0.17
LPCAT3-210ENST00000540090 K7EIL1 84 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 ARPC2O15144 300 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 CCNB2O95067 398 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 SOX14O95416 240 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 CCL3L1P16619 93 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 CD33P20138 364 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 PRDX6P30041 224 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 ACP7Q6ZNF0 438 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 ZNF561Q8N587 486 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 AQP11Q8NBQ7 271 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 OR8B12Q8NGG6 310 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 OR5A2Q8NGI9 324 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 OTOSQ8NHW6 89 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 MALSU1Q96EH3 234 aa16.09■□□□□ 0.17
LPCAT3-210ENST00000540090 FAM183AA6NL82 134 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 PEX14O75381 377 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 LYNP07948 512 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 PRDX2P32119 198 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 CD83Q01151 205 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 PLA1AQ53H76 456 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 CEP78Q5JTW2 689 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 Q6ZS46 218 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 TMEM219Q86XT9 240 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 CALHM1Q8IU99 346 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 ZNF454Q8N9F8 522 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 OR4M1Q8NGD0 313 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 OR2T27Q8NH04 317 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 RPS4Y2Q8TD47 263 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 THEM6Q8WUY1 208 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 ITFG2Q969R8 447 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 OR5M11Q96RB7 305 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 ABCB10Q9NRK6 738 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 ARGLU1Q9NWB6 273 aaPredicted RBP16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 PITPNC1Q9UKF7 332 aa16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 TBL2Q9Y4P3 447 aaKnown RBP16.08■□□□□ 0.16
LPCAT3-210ENST00000540090 COL7A1Q02388 2944 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 OR5B21A6NL26 309 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 MAP2K3P46734 347 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 PSMA6P60900 246 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 BLCAPP62952 87 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 PPP1R8Q12972 351 aaKnown RBP16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 ZNF273Q14593 569 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 C11orf87Q6NUJ2 197 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 HAGHLQ6PII5 290 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 FOXRED1Q96CU9 486 aaPredicted RBP16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 NIPAL2Q9H841 368 aa16.07■□□□□ 0.16
LPCAT3-210ENST00000540090 C17orf98A8MV24 154 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 SLC1A7O00341 560 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 VSIG8P0DPA2 414 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 DYNLT3P51808 116 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 DLX6P56179 175 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 SSX2Q16385 188 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 SMIM21Q3B7S5 101 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 DMRTC1Q5HYR2 192 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 LDLRAD2Q5SZI1 272 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 ZNF782Q6ZMW2 699 aaPredicted RBP16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 POC1AQ8NBT0 407 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 FAM81AQ8TBF8 368 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 OTULINQ96BN8 352 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 CDRT15Q96T59 188 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 OCSTAMPQ9BR26 566 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 OR51V1Q9H2C8 321 aa16.06■□□□□ 0.16
LPCAT3-210ENST00000540090 A0A0U1RQV5 110 aa16.05■□□□□ 0.16
LPCAT3-210ENST00000540090 ODF3BA8MYP8 253 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms