RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 AMY2BP19961 511 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 SLC34A1Q06495 639 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 KCNJ8Q15842 424 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 KLHL22Q53GT1 634 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 LAIR2Q6ISS4 152 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 SYS1Q8N2H4 156 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 FGFRL1Q8N441 504 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 OR5T2Q8NGG2 359 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 OR10AC1Q8NH08 325 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 AQP3Q92482 292 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 CLN8Q9UBY8 286 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 OR5V1Q9UGF6 321 aa15.22■□□□□ 0.03
SNRPA1-203ENST00000540017 OR4C45A6NMZ5 311 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 C22orf46C9J442 243 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 H0YAE9 185 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 UBCP0CG48 685 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 MUC1P15941 1255 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 SRSF2Q01130 221 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 ALKBH1Q13686 389 aaKnown RBP15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 UBE2V2Q15819 145 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 MICBQ29980 383 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 HAGHLQ6PII5 290 aaPredicted RBP15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 C1QL2Q7Z5L3 287 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 SETD9Q8NE22 299 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 CCL13Q99616 98 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 MDFIQ99750 246 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 JAM3Q9BX67 310 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 TRIM36Q9NQ86 728 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 INPP5EQ9NRR6 644 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 SNTG1Q9NSN8 517 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 DOCK11Q5JSL3 2073 aa15.21■□□□□ 0.03
SNRPA1-203ENST00000540017 IGHV2-70DA0A0C4DH43 119 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 ANKRD61A6NGH8 418 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 NDUFA2O43678 99 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 SYNGR1O43759 233 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 FSHBP01225 129 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 ISG15P05161 165 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 ETV1P50549 477 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 CCR9P51686 369 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 PAX8Q06710 450 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 IL18R1Q13478 541 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 TMEM244Q5VVB8 128 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 STUMQ69YW2 141 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 OR51A4Q8NGJ6 313 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 TRMT10AQ8TBZ6 339 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 NPRL2Q8WTW4 380 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 RAB40AQ8WXH6 277 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 ADAT3Q96EY9 351 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 MRPL48Q96GC5 212 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 TECTBQ96PL2 329 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 PLEKHA1Q9HB21 404 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 ERVK-18Q9QC07 812 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 KAAG1Q9UBP8 84 aa15.2■□□□□ 0.02
SNRPA1-203ENST00000540017 DVL1O14640 695 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 TMPRSS2O15393 492 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 HAAOP46952 286 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 XAF1Q6GPH4 301 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 ANGPTL5Q86XS5 388 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 FAM216BQ8N7L0 139 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 CCDC54Q8NEL0 328 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 FBLIM1Q8WUP2 373 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 TFAP2CQ92754 450 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 ZNF488Q96MN9 340 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 CHST5Q9GZS9 411 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 AUP1Q9Y679 476 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 HSPE1-MOB4S4R3N1 261 aa15.19■□□□□ 0.02
SNRPA1-203ENST00000540017 IGKV1-27A0A075B6S5 117 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 KIR2DS1A0A191URI9 304 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 J3QT63 122 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 SELLP14151 372 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 GLRA1P23415 457 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 DCKP27707 260 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 NPY4RP50391 375 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 GTF2A1P52655 376 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 KLF17Q5JT82 389 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 ATPAF1Q5TC12 328 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 OR2G6Q5TZ20 316 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 CALHM1Q8IU99 346 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 EGFL6Q8IUX8 553 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 C8orf59Q8N0T1 100 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 ANGPTL6Q8NI99 470 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 ZNF671Q8TAW3 534 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 GGHQ92820 318 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 FGGYQ96C11 551 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 C12orf43Q96C57 262 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 NUDT16L1Q9BRJ7 211 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 DNAJB11Q9UBS4 358 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 CLEC2DQ9UHP7 191 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 METRNQ9UJH8 293 aa15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 DIMT1Q9UNQ2 313 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-203ENST00000540017 IGKV1D-17A0A075B6S4 117 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 IGKV1-9A0A0C4DH69 117 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 FAM230AA0A1W2PPH8 454 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 XPNPEP2O43895 674 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 ZFPL1O95159 310 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 TGM4P49221 684 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 AQP4P55087 323 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 ZNF573Q86YE8 665 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 BATF2Q8N1L9 274 aa15.17■□□□□ 0.02
SNRPA1-203ENST00000540017 ZNF676Q8N7Q3 588 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms