RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 TBX21Q9UL17 535 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 RAB26Q9ULW5 256 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 PSG11Q9UQ72 335 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 ERGIC3Q9Y282 383 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 ASF1AQ9Y294 204 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 GOLT1BQ9Y3E0 138 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 L3MBTL1Q9Y468 752 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF532Q9HCE3 1301 aa3.11□□□□□ -1.91
AC055720.1-201ENST00000539552 DENND4AQ7Z401 1863 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 KIAA1109Q2LD37 5005 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 A0A1W2PRG6 482 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 B4DXG7 233 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 E9PAM4 449 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 F5H5T6 163 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 LOC110117498-PIK3R3F6TDL0 507 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 C16orf97H3BN30 126 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 KPNA3O00505 521 aaPredicted RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PHF1O43189 567 aaPredicted RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 FKBP6O75344 327 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 CTDNEP1O95476 244 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ATP6V1G2O95670 118 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 NUDT14O95848 222 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 DHFRP00374 187 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 RLN2P04090 185 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 HOXC4P09017 264 aaPredicted RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 OR8U9P0C7N5 309 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 FRMD6-AS1P0C7T7 363 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC2A1P11166 492 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 UGT2B7P16662 529 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 MT3P25713 68 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PSMA1P25786 263 aaKnown RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 HTR1FP30939 366 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 FCGR2CP31995 323 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SSTR5P35346 364 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 KIR2DS4P43632 304 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 CDK9P50750 372 aaKnown RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 EFNA3P52797 238 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 AQP5P55064 265 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PEX3P56589 373 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 CLDN12P56749 244 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 RPS27AP62979 156 aaKnown RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ACVR1Q04771 509 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 BCL2L1Q07817 233 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TFDP2Q14188 446 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 NFATC4Q14934 902 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PON3Q15166 354 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TAF1AQ15573 450 aaPredicted RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TAB1Q15750 504 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TBC1D28Q2M2D7 210 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ODF3L2Q3SX64 289 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TTLL9Q3SXZ7 439 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ZBED5Q49AG3 693 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SPIN4Q56A73 249 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 CASP12Q6UXS9 341 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 APOOLQ6UXV4 268 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TMED4Q7Z7H5 227 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PIP4P1Q86T03 277 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 LHFPL3Q86UP9 236 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 HORMAD1Q86X24 394 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PLA2G4DQ86XP0 818 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PIANPQ8IYJ0 282 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 OR1M1Q8NGA1 313 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 OR8U1Q8NH10 309 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ACTRT1Q8TDG2 376 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 FBXO17Q96EF6 278 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ZNF354BQ96LW1 612 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SCGB3A2Q96PL1 93 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 GPR21Q99679 349 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PDCD1LG2Q9BQ51 273 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 CDCA4Q9BXL8 241 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 OR51B5Q9H339 312 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ADGRL4Q9HBW9 690 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 ABCB9Q9NP78 766 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 TIGARQ9NQ88 270 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 GIN1Q9NXP7 522 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SMPXQ9UHP9 88 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 SAMD4AQ9UPU9 718 aaKnown RBP3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 KLF12Q9Y4X4 402 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 PLXNB3Q9ULL4 1909 aa3.1□□□□□ -1.91
AC055720.1-201ENST00000539552 NLRC5Q86WI3 1866 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 ATG2BQ96BY7 2078 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 IGHV4-61A0A0C4DH41 118 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 MEIOCA2RUB1 952 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 A6NDN8 102 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 ANKRD63C9JTQ0 380 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 SMKR1H3BMG3 65 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 K7EMT4 169 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 SULT2B1O00204 365 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 FABP7O15540 132 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 RAD51CO43502 376 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 BUB3O43684 328 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 SLC16A7O60669 478 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 GATBO75879 557 aaKnown RBP3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 DCTN3O75935 186 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 PAK4O96013 591 aaPredicted RBP3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 CD8AP01732 235 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 IGHV4-59P01825 116 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 CRYAAP02489 173 aa3.09□□□□□ -1.91
AC055720.1-201ENST00000539552 CD55P08174 381 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms