RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 OR2M3Q8NG83 312 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 RAB3CQ96E17 227 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 MRGPRX4Q96LA9 322 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 C1orf147Q96MC9 270 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 OR5B2Q96R09 309 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 OCIAD1Q9NX40 245 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 SLC2A8Q9NY64 477 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 EHFQ9NZC4 300 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 FLVCR1Q9Y5Y0 555 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 F8VVB4 439 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 F8VWA3 439 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 JMJD7P0C870 316 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 PTAFRP25105 342 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 CSNK2A1P68400 391 aaPredicted RBP11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 OR5AS1Q8N127 324 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 CSNK2A3Q8NEV1 391 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 OR10H5Q8NGA6 315 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 RASL10BQ96S79 203 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 SLCO5A1Q9H2Y9 848 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 METTL7AQ9H8H3 244 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 FAM86C1Q9NVL1 165 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF581Q9P0T4 197 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 ASH2LQ9UBL3 628 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 URGCP-MRPS24S4R325 110 aa11.04□□□□□ -0.64
SFSWAP-208ENST00000539506 IGLV3-32A0A0A0MS00 114 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 FAM221AA4D161 298 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 TOX3O15405 576 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 CLRN1P58418 232 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 IAH1Q2TAA2 248 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 TMEM128Q5BJH2 165 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 THEM4Q5T1C6 240 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 PRAMEF20Q5VT98 475 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 UEVLDQ8IX04 471 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 NOXO1Q8NFA2 376 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 OR8B12Q8NGG6 310 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 EDARADDQ8WWZ3 215 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 ERGIC1Q969X5 290 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 TMEM100Q9NV29 134 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 IGKV1D-8A0A087WSZ0 117 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 PQLC2LA1A4F0 135 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 ACY1Q03154 408 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 SPEM2Q0P670 501 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 PDCD1Q15116 288 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 MIDNQ504T8 468 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 HOGA1Q86XE5 327 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 SLC22A24Q8N4F4 322 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 OR13G1Q8NGZ3 307 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 CCDC74BQ96LY2 380 aa11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 RTBDNQ9BSG5 229 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 MYOZ1Q9NP98 299 aaPredicted RBP11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
SFSWAP-208ENST00000539506 C7orf77A4D0Y5 90 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 TMEM14DPA8MWL7 114 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF878C9JN71 531 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF121P58317 390 aaPredicted RBP11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 SLC25A47Q6Q0C1 308 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 KLHL24Q6TFL4 600 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 OR5H2Q8NGV7 314 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 TCEAL3Q969E4 200 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 TOMM40LQ969M1 308 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 SLC5A7Q9GZV3 580 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 LPAR5Q9H1C0 372 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 FBXL17Q9UF56 701 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 MRPS28Q9Y2Q9 187 aaKnown RBP11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.64
SFSWAP-208ENST00000539506 ZNF727A8MUV8 499 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 TNFSF12O43508 249 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 ZFAND5O76080 213 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 PRH1P02810 166 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 ZNF20P17024 532 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SERPINA2P20848 420 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 FCGR2CP31995 323 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 HIST3H3Q16695 136 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 TMEM176BQ3YBM2 270 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 CRIP3Q6Q6R5 217 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 C20orf196Q8IYI0 205 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 ZDHHC22Q8N966 263 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 OR5D14Q8NGL3 314 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 RGCCQ9H4X1 137 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 CHCHD2Q9Y6H1 151 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 MASP2O00187 686 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 CLN5O75503 358 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 NXPH3O95157 252 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 BPNT1O95861 308 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 QDPRP09417 244 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 EPHA8P29322 1005 aaPredicted RBP11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 PI4KAP42356 2102 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 RRADP55042 308 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 SNU13P55769 128 aaKnown RBP11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 TMEM33P57088 247 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 PHYHD1Q5SRE7 291 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 PHF19Q5T6S3 580 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 OR51T1Q8NGJ9 327 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 OR5L2Q8NGL0 311 aa11.02□□□□□ -0.65
SFSWAP-208ENST00000539506 ADAMTS17Q8TE56 1095 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms