RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 DMRTC2Q8IXT2 367 aaPredicted RBP16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 SEMA6DQ8NFY4 1073 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 RAB39BQ96DA2 213 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 KCNK17Q96T54 332 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 LAMA1P25391 3075 aa16.37■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF727A8MUV8 499 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 NPIPA5E9PKD4 350 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 K7N7A8 449 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 CXCL1P09341 107 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 TAGLN2P37802 199 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 HSD11B2P80365 405 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 KHDC3LQ587J8 217 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 HSD17B11Q8NBQ5 300 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 FAM213BQ8TBF2 198 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 PTPMT1Q8WUK0 201 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 DAZLQ92904 295 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 RELTQ969Z4 430 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 GPR61Q9BZJ8 451 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 ZDHHC8Q9ULC8 765 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 NPIPA1Q9UND3 350 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 A0A1B0GV50 99 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 TNFRSF10CO14798 259 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 SOD3P08294 240 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 HCKP08631 526 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 POU2F2P09086 479 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 DAP3P51398 398 aaKnown RBP16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 NKX6-1P78426 367 aaPredicted RBP16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 APCDD1LQ8NCL9 501 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 OR51T1Q8NGJ9 327 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 OR13D1Q8NGV5 346 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 PHOSPHO2Q8TCD6 241 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 BMFQ96LC9 184 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 NKX2-4Q9H2Z4 354 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 MOB1AQ9H8S9 216 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 MUC3AQ02505 3323 aa16.36■□□□□ 0.21
SFSWAP-207ENST00000538548 A0A087X0M5 115 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 A0A1B0GX30 115 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 A0A1W2PQD3 144 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 OR5H15A6NDH6 313 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 OR5H1A6NKK0 313 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 ALG1L2C9J202 215 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 LINC01565O15544 149 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 HEXBP07686 556 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 IL12BP29460 328 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 LBHQ53QV2 105 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 HIST2H3PS2Q5TEC6 136 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 SFTPA2Q8IWL1 248 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 OR10S1Q8NGN2 331 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 GPER1Q99527 375 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF726A6NNF4 738 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF724A8MTY0 619 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 FTCDNL1E5RQL4 147 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 UBE2KP61086 200 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF343Q6P1L6 599 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 PLXDC2Q6UX71 529 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 TMEM182Q6ZP80 229 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 GRINAQ7Z429 371 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 C11orf40Q8WZ69 217 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 SHDQ96IW2 340 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 GAS2L1Q99501 681 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF2Q9BSG1 426 aaPredicted RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 TBL1XR1Q9BZK7 514 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 OR8D2Q9GZM6 311 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 SIRT7Q9NRC8 400 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 PHF3Q92576 2039 aaKnown RBP16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
SFSWAP-207ENST00000538548 MED19A0JLT2 244 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 RBFOX3A6NFN3 312 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 FOXI3A8MTJ6 420 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 SERPINE3A8MV23 424 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 ZNF878C9JN71 531 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 HPNP05981 417 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 NDUFB7P17568 137 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 SSX2Q16385 188 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 GFI1BQ5VTD9 330 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 ABHD12BQ7Z5M8 362 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 COMMD2Q86X83 199 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 ADIPOR1Q96A54 375 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 MMABQ96EY8 250 aaPredicted RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 GAL3ST4Q96RP7 486 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 KCNIP3Q9Y2W7 256 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 MS4A18H0YCH9 400 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 PTBP3O95758 552 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 ERVFRD-1P60508 538 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 LSM6P62312 80 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 MS4A18Q3C1V0 323 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 ARMC6Q6NXE6 501 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 WDFY1Q8IWB7 410 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 TGM7Q96PF1 710 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 IER2Q9BTL4 223 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 PNO1Q9NRX1 252 aaKnown RBP16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 DECR2Q9NUI1 292 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 KNL1Q8NG31 2342 aa16.34■□□□□ 0.21
SFSWAP-207ENST00000538548 BTBD17A6NE02 478 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 RRP8O43159 456 aaKnown RBP16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 IL11P20809 199 aa16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 BLVRBP30043 206 aaPredicted RBP16.33■□□□□ 0.21
SFSWAP-207ENST00000538548 METTL27Q8N6F8 245 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms