RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF222Q9UK12 451 aa11.31□□□□□ -0.6
SMARCA4-206ENST00000538456 CCDC22O60826 627 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 CST4P01036 141 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 FABP3P05413 133 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 H2BFMP0C1H6 154 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 PF4V1P10720 104 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 PAICSP22234 425 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 MSX2P35548 267 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 FAM76BQ5HYJ3 339 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 DMRTC1Q5HYR2 192 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 TMEM200BQ69YZ2 307 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 HACD2Q6Y1H2 254 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 Q6ZS46 218 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 CCDC121Q6ZUS5 278 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 THAP5Q7Z6K1 395 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 INTS14Q96SY0 518 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 BTBD10Q9BSF8 475 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 NMNAT2Q9BZQ4 307 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 WNT10AQ9GZT5 417 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 SPAG4Q9NPE6 437 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 ABCB10Q9NRK6 738 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 DNAH9Q9NYC9 4486 aa11.3□□□□□ -0.6
SMARCA4-206ENST00000538456 A0A1W2PPH5 198 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 A6NDX4 124 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 VGLL3A8MV65 326 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 ZNF732B4DXR9 585 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 SOX14O95416 240 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 PF4P02776 101 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 FAHP16930 419 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 OPRL1P41146 370 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 VDAC2P45880 294 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 CEBPDP49716 269 aaPredicted RBP11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 SLC25A1P53007 311 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 CEP78Q5JTW2 689 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 LINC01590Q5TEZ4 76 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 C11orf42Q8N5U0 333 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 OR4Q3Q8NH05 313 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 OTULINQ96BN8 352 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 SDSLQ96GA7 329 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 LYZL4Q96KX0 146 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 HIST1H2AAQ96QV6 131 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 TSSK6Q9BXA6 273 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 MED20Q9H944 212 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 IL20Q9NYY1 176 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 USE1Q9NZ43 259 aa11.29□□□□□ -0.6
SMARCA4-206ENST00000538456 hCG_1809904A0A1W2PP81 198 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 A0A1W2PPE2 198 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 A0A1W2PR64 198 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 A0A1W2PRV1 198 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 FAM183AA6NL82 134 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 ARG1P05089 322 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 PIPP12273 146 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 BLVRAP53004 296 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 KRTAP10-11P60412 298 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 BLCAPP62952 87 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 SLC35A2P78381 396 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 CD69Q07108 199 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 ZNF273Q14593 569 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 SSX2Q16385 188 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 CD177Q8N6Q3 437 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 FAM81AQ8TBF8 368 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 ZNF488Q96MN9 340 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 OR51I2Q9H344 312 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 MUC13Q9H3R2 512 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 ARMC1Q9NVT9 282 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 PITPNC1Q9UKF7 332 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
SMARCA4-206ENST00000538456 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 RIIAD1A6NNX1 92 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 F2RL2O00254 374 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 SLC1A7O00341 560 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 MTRF1O75570 445 aaKnown RBP11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 GASTP01350 101 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 JUNBP17275 347 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 GSTT1P30711 240 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 GNG3P63215 75 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 SMIM21Q3B7S5 101 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 HAGHLQ6PII5 290 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 RASSF6Q6ZTQ3 369 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 AQP11Q8NBQ7 271 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 OR8B12Q8NGG6 310 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 OR2T27Q8NH04 317 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 AQP3Q92482 292 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 FOXRED1Q96CU9 486 aaPredicted RBP11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 WWC2-AS2Q96NR7 200 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 IL1RAPQ9NPH3 570 aa11.27□□□□□ -0.61
SMARCA4-206ENST00000538456 TAS2R1Q9NYW7 299 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms