RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 TMPRSS11AQ6ZMR5 421 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 PRSS48Q7RTY5 328 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 FAM90A1Q86YD7 464 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 BOLLQ8N9W6 283 aaKnown RBP10.95□□□□□ -0.66
CHFR-216ENST00000538235 OR13C3Q8NGS6 347 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 OR13C9Q8NGT0 318 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 LRRC29Q8WV35 223 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 AQP3Q92482 292 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 GHSRQ92847 366 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 MSI2Q96DH6 328 aaKnown RBP10.95□□□□□ -0.66
CHFR-216ENST00000538235 C1orf159Q96HA4 380 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TMEM246Q9BRR3 403 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 RTL8AQ9BWD3 113 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TMEM165Q9HC07 324 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 VCX3AQ9NNX9 186 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TAS2R4Q9NYW5 299 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TPRKBQ9Y3C4 175 aa10.95□□□□□ -0.66
CHFR-216ENST00000538235 TRAV8-7A0A075B6U6 113 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 TRBV5-7A0A0A0MS05 114 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 IGKV1-12A0A0C4DH73 117 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 CEACAM18A8MTB9 384 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 KIAA1324LA8MWY0 1029 aaPredicted RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 SRRM5B3KS81 715 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 AKR7A2O43488 359 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 MTRF1O75570 445 aaKnown RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 IGKV1D-12P01611 117 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 SELLP14151 372 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 GABARAPL2P60520 117 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 GMFBP60983 142 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 ACSM1Q08AH1 577 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 TBCEQ15813 527 aaPredicted RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 SSX1Q16384 188 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 ZNF404Q494X3 552 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 HAGHLQ6PII5 290 aaPredicted RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 ANGPTL5Q86XS5 388 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 EGFL6Q8IUX8 553 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 MYDGFQ969H8 173 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 RFT1Q96AA3 541 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 CYYR1Q96J86 154 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 NR1H4Q96RI1 486 aaPredicted RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 MICU1Q9BPX6 476 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 PPIL3Q9H2H8 161 aaKnown RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 FN3KRPQ9HA64 309 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 SMURF1Q9HCE7 757 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 TRIM36Q9NQ86 728 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 IL36RNQ9UBH0 155 aa10.94□□□□□ -0.66
CHFR-216ENST00000538235 SF3B6Q9Y3B4 125 aaKnown RBP10.94□□□□□ -0.66
CHFR-216ENST00000538235 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 ISPDA4D126 451 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 TMEM210A6NLX4 147 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 ANXA2P2A6NMY6 339 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 PLPP2O43688 288 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 ATF1P18846 271 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 CELP19835 753 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 MPZP25189 248 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 AZGP1P25311 298 aaKnown RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 ZFP36P26651 326 aaKnown RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 RPS25P62851 125 aaKnown RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 GNG3P63215 75 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 EMX1Q04741 257 aaPredicted RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 MRPL28Q13084 256 aaKnown RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 SPHARQ15513 63 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 KCTD8Q6ZWB6 473 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 UTS2BQ765I0 119 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 LRRC28Q86X40 367 aaPredicted RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 PARP16Q8N5Y8 322 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 SPERTQ8NA61 448 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 DEFB108BQ8NET1 73 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 OR5A2Q8NGI9 324 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 MRPL48Q96GC5 212 aaKnown RBP10.93□□□□□ -0.66
CHFR-216ENST00000538235 MND1Q9BWT6 205 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 CCDC90BQ9GZT6 254 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 ZNF665Q9H7R5 613 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 PLEKHA1Q9HB21 404 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 LPAR2Q9HBW0 351 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 ACOT13Q9NPJ3 140 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 C14orf119Q9NWQ9 140 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 ETAA1Q9NY74 926 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 RNF7Q9UBF6 113 aa10.93□□□□□ -0.66
CHFR-216ENST00000538235 NF1P21359 2839 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 FAM230AA0A1W2PPH8 454 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 A0A1W2PPK0 400 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 hCG_1807616A0A1W2PRN6 198 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 OR5B21A6NL26 309 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 SC5DO75845 299 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 PLATP00750 562 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 FOSL1P15407 271 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 IGFBP3P17936 291 aaPredicted RBP10.92□□□□□ -0.66
CHFR-216ENST00000538235 HAAOP46952 286 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
CHFR-216ENST00000538235 CHN2P52757 468 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 ZP1P60852 638 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 BDH1Q02338 343 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 MED22Q15528 200 aa10.92□□□□□ -0.66
CHFR-216ENST00000538235 LIPKQ5VXJ0 399 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms