RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 FAM90A10PA6NDY2 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A18PA6NE21 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A16PA6NEW6 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 OR5H14A6NHG9 310 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A20PA6NIJ5 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A8PA6NJQ4 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A7PA6NKC0 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A22PA8MWA6 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A12PA8MX19 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A5PA8MXJ8 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A23PA8MXZ1 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 RRP8O43159 456 aaKnown RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 LRP3O75074 770 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MPC2O95563 127 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 NRASP01111 189 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 PMP2P02689 132 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SP1P08047 785 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 DBHP09172 617 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MMP7P09237 267 aaPredicted RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A15PP0C7V4 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A14PP0C7W9 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 PET100P0DJ07 73 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 CXCL2P19875 107 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SERPINA2P20848 420 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SDHBP21912 280 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 VAMP1P23763 118 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SSTR2P30874 369 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 CALCRP30988 508 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 STARP49675 285 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MEOX1P50221 254 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 TMEM50BP56557 158 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 CLDN18P56856 261 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SOX8P57073 446 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SORDQ00796 357 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MALLQ13021 153 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 PPP1R1AQ13522 171 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MICBQ29980 383 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 LY6G6FQ5SQ64 297 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SPINK14Q6IE38 97 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 OR52W1Q6IF63 320 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 DHRS13Q6UX07 377 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 GSG1LQ6UXU4 331 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 ASCL4Q6XD76 172 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 TMUB2Q71RG4 321 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SLC51BQ86UW2 128 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 LHFPL1Q86WI0 220 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 GVQW1Q8N7I0 195 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 ZFP62Q8NB50 900 aaPredicted RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 MDS2Q8NDY4 140 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 CSNK2A3Q8NEV1 391 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 OR5AP2Q8NGF4 316 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 OR6K3Q8NGY3 331 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 THAP6Q8TBB0 222 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 NPRL2Q8WTW4 380 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 ABHD3Q8WU67 409 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 EMG1Q92979 244 aaKnown RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 PIGTQ969N2 578 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SPSB4Q96A44 273 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 APH1AQ96BI3 265 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SIGLEC12Q96PQ1 595 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 SOX7Q9BT81 388 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MFFQ9GZY8 342 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 ARL6Q9H0F7 186 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 PPA2Q9H2U2 334 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 RAB18Q9NP72 206 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 ACKR4Q9NPB9 350 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 GPR173Q9NS66 373 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 MED9Q9NWA0 146 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 C14orf166Q9Y224 244 aaKnown RBP5.78□□□□□ -1.48
USP28-206ENST00000538224 MEMO1Q9Y316 297 aa5.78□□□□□ -1.48
USP28-206ENST00000538224 USP34Q70CQ2 3546 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 BDP1A6H8Y1 2624 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 RPS10-NUDT3A0A1W2PQS6 291 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PMS2P1A4D2B8 440 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 FIGNL2A6NMB9 653 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 OR2AT4A6NND4 320 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 LEUTXA8MZ59 168 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 E9PLN8 166 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 J3QW42 95 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 MASP2O00187 686 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 EFSO43281 561 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 GALR2O43603 387 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 HTR3BO95264 441 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SIX6O95475 246 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SFT2D2O95562 160 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 ACKR3P25106 362 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 NUP62P37198 522 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 MAGEA5P43359 124 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SNU13P55769 128 aaKnown RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 PPIAP62937 165 aaKnown RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 FAM3AP98173 230 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PLP2Q04941 152 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
USP28-206ENST00000538224 SLC10A1Q14973 349 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 PABPC1L2AQ5JQF8 200 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 NHLRC3Q5JS37 347 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 SFRP5Q5T4F7 317 aa5.77□□□□□ -1.49
USP28-206ENST00000538224 TSPO2Q5TGU0 170 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms