RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 ZCCHC14Q8WYQ9 949 aaKnown RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 GAL3ST2Q9H3Q3 398 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 RRP8O43159 456 aaKnown RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 GCGP01275 180 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 HPXP02790 462 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 OR5G3P0C626 314 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 DEFA4P12838 97 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 RCC1P18754 421 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 PRLHRP49683 370 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 OR4C12Q96R67 309 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 CMC2Q9NRP2 79 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 MBD1Q9UIS9 605 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 TMEM272A0A1B0GTI8 110 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 APBB3O95704 486 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 TMIGD3P0DMS9 266 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 CST5P28325 142 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 BRS3P32247 399 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 RGRP47804 291 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 LBX1P52954 281 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 OR10G3Q8NGC4 313 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 GPR84Q9NQS5 396 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 FOXJ3Q9UPW0 622 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 MASP2O00187 686 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 FAM87AP0C7U9 286 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 TCN2P20062 427 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 CTAG1AP78358 180 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 NKAIN4Q8IVV8 208 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 TMEFF1Q8IYR6 380 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 PRSS3P2Q8NHM4 247 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 SLC35A4Q96G79 324 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 LIPGQ9Y5X9 500 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 RICTORQ6R327 1708 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 CDC14CA4D256 554 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 CLN3Q13286 438 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 MFAP5Q13361 173 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 EDDM3AQ14507 147 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 ZNF77Q15935 545 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 ROBO4Q8WZ75 1007 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 ADAT3Q96EY9 351 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-215ENST00000537824 RSG1Q9BU20 258 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 ULBP2Q9BZM5 246 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 SLCO1C1Q9NYB5 712 aa5.12□□□□□ -1.59
CSMD1-215ENST00000537824 NRASP01111 189 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 HRASP01112 189 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 KRASP01116 189 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 GPM6BQ13491 265 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 ZNF880Q6PDB4 577 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 MARCH3Q86UD3 253 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 OR4A4PQ8NGN8 299 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 OR1P1Q8NH06 330 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 MAP1LC3CQ9BXW4 147 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 TREM2Q9NZC2 230 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 SLC5A6Q9Y289 635 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 SERINC4A6NH21 518 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 NCBP2LA6PVI3 153 aaKnown RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 TGM5O43548 720 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 DUSP11O75319 330 aaKnown RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CRYAAP02489 173 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 MMP9P14780 707 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 SHHQ15465 462 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 RTP2Q5QGT7 225 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 RAB33BQ9H082 229 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 H0YGG7 62 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 ADAM20O43506 726 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CER1O95813 267 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 KLK2P20151 261 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 GLRA1P23415 457 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CTSSP25774 331 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 SUB1P53999 127 aaKnown RBP eCLIP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 RAB32Q13637 225 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 PNLIPRP3Q17RR3 467 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 ERASQ7Z444 233 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 ARHGEF39Q8N4T4 335 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 PRR13Q9NZ81 148 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 H3BQ15 152 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 COX7A2P2O60397 106 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 GJA4P35212 333 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CTSCP53634 463 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 LBX2Q6XYB7 198 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CALHM3Q86XJ0 350 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 EIF4E3Q8N5X7 224 aaKnown RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 RAB37Q96AX2 223 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 SLC17A5Q9NRA2 495 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 RASL12Q9NYN1 266 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 FLG2Q5D862 2391 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 STRCQ7RTU9 1775 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 HMGN4O00479 90 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 GABRA1P14867 456 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 FAM3AP98173 230 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 ZNF542PQ5EBM4 170 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 C12orf54Q6X4T0 127 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 OR10AD1Q8NGE0 317 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 OR2A5Q96R48 311 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 MRPL13Q9BYD1 178 aaKnown RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 NAA60Q9H7X0 242 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
CSMD1-215ENST00000537824 A0A0J9YY10 115 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 HS3ST1O14792 307 aa5.11□□□□□ -1.59
CSMD1-215ENST00000537824 CFIP05156 583 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms