RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SLC22A25Q6T423 547 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SHISA2Q6UWI4 295 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 TMEM64Q6YI46 380 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 TMEM150AQ86TG1 271 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 WDFY1Q8IWB7 410 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 IL22RA1Q8N6P7 574 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 COX18Q8N8Q8 333 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SLC24A4Q8NFF2 622 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 OR5D18Q8NGL1 313 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ZNF417Q8TAU3 575 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 MRGPRDQ8TDS7 321 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SARAFQ96BY9 339 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 PCGF1Q9BSM1 259 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 FAM103A1Q9BTL3 118 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 NMNAT2Q9BZQ4 307 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SLCO5A1Q9H2Y9 848 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 BRF2Q9HAW0 419 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 IL26Q9NPH9 171 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 RXFP3Q9NSD7 469 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ZNF107Q9UII5 783 aaPredicted RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 SERTAD3Q9UJW9 196 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SLC13A4Q9UKG4 626 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ICAM5Q9UMF0 924 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 V9GYS6 101 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 PRRC2BQ5JSZ5 2229 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 SPTBN5Q9NRC6 3674 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 IGKV6-21A0A0C4DH24 114 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 DCDC2BA2VCK2 349 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 FGF10O15520 208 aaPredicted RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 SNAPC5O75971 98 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 STK17BO94768 372 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 NXPH3O95157 252 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 DTYMKP23919 212 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 RPL12P30050 165 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 CEACAM3P40198 252 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 CDKN2AP42771 156 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 GLIPR1P48060 266 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 COMPP49747 757 aaPredicted RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 ZNF83P51522 516 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SLC35A1P78382 337 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ZNF763Q0D2J5 394 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 GNMTQ14749 295 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ELOCQ15369 112 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 PCK2Q16822 640 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 C10orf120Q5SQS8 335 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 GDF7Q7Z4P5 450 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 MRGPREQ86SM8 312 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 TMEM105Q8N8V8 129 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 MRPL43Q8N983 215 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 NPEPL1Q8NDH3 523 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 OR52E2Q8NGJ4 325 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 OR2T27Q8NH04 317 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 UBE2E3Q969T4 207 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 ANKRD9Q96BM1 317 aaPredicted RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 PRRC1Q96M27 445 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 MS4A10Q96PG2 267 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 LYSMD1Q96S90 227 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 MIEN1Q9BRT3 115 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 CABLES2Q9BTV7 478 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 TRIM2Q9C040 744 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 OR8D2Q9GZM6 311 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 CNTD2Q9H8S5 307 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 C14orf166Q9Y224 244 aaKnown RBP3.29□□□□□ -1.88
MCF2-210ENST00000536274 KLHDC2Q9Y2U9 406 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 SCN8AQ9UQD0 1980 aa3.29□□□□□ -1.88
MCF2-210ENST00000536274 F2Z2F3 143 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SDCBPO00560 298 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 SH2D1BO14796 132 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SYT7O43581 403 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CDC40O60508 579 aaKnown RBP eCLIP3.28□□□□□ -1.88
MCF2-210ENST00000536274 GGCTO75223 188 aaKnown RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLCO2B1O94956 709 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CYB5AP00167 134 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TACR2P21452 398 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OMGP23515 440 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 GRK6P43250 576 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC6A9P48067 706 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB11AP62491 216 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB1AP62820 205 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 B4GALNT1Q00973 533 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 DUSP2Q05923 314 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 FOXF1Q12946 379 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 HMGN3Q15651 99 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TMEM176BQ3YBM2 270 aaPredicted RBP3.28□□□□□ -1.88
MCF2-210ENST00000536274 RAB41Q5JT25 222 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 LRRC69Q6ZNQ3 347 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 ASCL5Q7RTU5 278 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SLC25A42Q86VD7 318 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 MCEMP1Q8IX19 187 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 KLHDC8AQ8IYD2 350 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 SHISA5Q8N114 240 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TTC9BQ8N6N2 239 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 TOP6BLQ8N6T0 577 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 CHST4Q8NCG5 386 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 KREMEN2Q8NCW0 462 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OR51A2Q8NGJ7 313 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OR5L2Q8NGL0 311 aa3.28□□□□□ -1.88
MCF2-210ENST00000536274 OR14L1PQ8NHC6 308 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms