RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 H2BFMP0C1H6 154 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 SLC2A5P22732 501 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 MAP2K3P46734 347 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 DLX6P56179 175 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 TRIM25Q14258 630 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 ERI1Q8IV48 349 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 PDZD9Q8IXQ8 264 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 POC1AQ8NBT0 407 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 OR11H6Q8NGC7 330 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 OR5T2Q8NGG2 359 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 OR6N2Q8NGY6 317 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 FAM110DQ8TAY7 271 aaPredicted RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 PGAM5Q96HS1 289 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 RNF170Q96K19 258 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 ELAC2Q9BQ52 826 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 YIPF3Q9GZM5 350 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 ARMC1Q9NVT9 282 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 FAM206AQ9NX38 181 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 TBL2Q9Y4P3 447 aaKnown RBP9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
CLSTN3-206ENST00000535668 hCG_1809904A0A1W2PP81 198 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 A0A1W2PPE2 198 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 A0A1W2PR64 198 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 A0A1W2PRV1 198 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ADARB2-AS1A8MUL3 147 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 C17orf98A8MV24 154 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ODF3BA8MYP8 253 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 G3V4G9 280 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 RHBDL1O75783 438 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 DCTN3O75935 186 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 HMGN1P05114 100 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 PGA5P0DJD9 388 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ATP6V1B2P21281 511 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 GLRA1P23415 457 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 MSX2P35548 267 aaPredicted RBP9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 RASSF2P50749 326 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ERVK11-1P61568 191 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 CDK5Q00535 292 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 KLRD1Q13241 179 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 SMIM21Q3B7S5 101 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ACP7Q6ZNF0 438 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 THAP5Q7Z6K1 395 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 NDUFA11Q86Y39 141 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 ZNRF1Q8ND25 227 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 OR8B12Q8NGG6 310 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 OR51G2Q8NGK0 314 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 C17orf50Q8WW18 174 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 MALSU1Q96EH3 234 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 HIST1H2AAQ96QV6 131 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 FEVQ99581 238 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 NRIP2Q9BQI9 281 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 REEP1Q9H902 201 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 VNN3Q9NY84 501 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 USE1Q9NZ43 259 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 NUFIP1Q9UHK0 495 aaKnown RBP9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 SAMHD1Q9Y3Z3 626 aaKnown RBP9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 V9GYQ6 96 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 STAB2Q8WWQ8 2551 aa9.08□□□□□ -0.96
CLSTN3-206ENST00000535668 A0A1W2PQ09 198 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 FAM90A22PA8MWA6 464 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 CHST1O43916 411 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 RAP2AP10114 183 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 FAHP16930 419 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 RPL31P62899 125 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 RIPPLY1Q0D2K3 151 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 KCTD18Q6PI47 426 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 DEFB107AQ8IZN7 70 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 PNKDQ8N490 385 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 KLHDC1Q8N7A1 406 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 TEX47Q8TBZ9 253 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 H1FXQ92522 213 aaKnown RBP9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 FOXRED1Q96CU9 486 aaPredicted RBP9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 NIPSNAP1Q9BPW8 284 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 ZNF702PQ9H963 129 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 C19orf12Q9NSK7 152 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 SNTG1Q9NSN8 517 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 ARL8BQ9NVJ2 186 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 PITPNC1Q9UKF7 332 aa9.07□□□□□ -0.96
CLSTN3-206ENST00000535668 PQLC2LA1A4F0 135 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 A6NDX4 124 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 FAM183AA6NL82 134 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 ZNF732B4DXR9 585 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 PRR23D1E9PI22 279 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 H0YAE9 185 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 J3QT63 122 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 K7N7A8 449 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 DLGAP1O14490 977 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 SRSF10O75494 262 aaKnown RBP9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 DNAJC8O75937 253 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 SOX14O95416 240 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 PRR23D2P0DMB1 279 aaPredicted RBP9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 NDUFB7P17568 137 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 PRDX2P32119 198 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 GPM6AP51674 278 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 DLX1P56177 255 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 LOXL3P58215 753 aa9.06□□□□□ -0.96
CLSTN3-206ENST00000535668 ERVFRD-1P60508 538 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms