RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 METTL17Q9H7H0 456 aaPredicted RBP18.29■□□□□ 0.52
SSPN-204ENST00000535504 CNOT2Q9NZN8 540 aaKnown RBP18.29■□□□□ 0.52
SSPN-204ENST00000535504 FRRS1LQ9P0K9 344 aa18.29■□□□□ 0.52
SSPN-204ENST00000535504 SRRM5B3KS81 715 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 LHBP01229 141 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 GYPAP02724 150 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 RBMXP38159 391 aaKnown RBP18.28■□□□□ 0.52
SSPN-204ENST00000535504 HAAOP46952 286 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 GMFBP60983 142 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 TEX36Q5VZQ5 186 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 TMEM42Q69YG0 159 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 IL17RELQ6ZVW7 336 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 C11orf53Q8IXP5 236 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 TMIGD2Q96BF3 282 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 BORCS8Q96FH0 119 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 CHST5Q9GZS9 411 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 OR51I2Q9H344 312 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 SCN3BQ9NY72 215 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 WNK2Q9Y3S1 2297 aa18.28■□□□□ 0.52
SSPN-204ENST00000535504 TRBV2A0A0J9YWF9 115 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 FAM230AA0A1W2PPH8 454 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 A6NIN4 97 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 J3QT63 122 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 MYL12BO14950 172 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 TMPRSS2O15393 492 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 PHF1O43189 567 aaPredicted RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 CYB5AP00167 134 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 PIPP12273 146 aaPredicted RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 TGM4P49221 684 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 FUT6P51993 359 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 AQP4P55087 323 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 CCDC58Q4VC31 144 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 RDH10Q8IZV5 341 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 BPIFB6Q8NFQ5 453 aa18.27■□□□□ 0.52
SSPN-204ENST00000535504 TRMT10AQ8TBZ6 339 aaKnown RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 TSEN15Q8WW01 171 aaKnown RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 POLR3KQ9Y2Y1 108 aaPredicted RBP18.27■□□□□ 0.52
SSPN-204ENST00000535504 NIPBLQ6KC79 2804 aaeCLIP18.27■□□□□ 0.51
SSPN-204ENST00000535504 NAV3Q8IVL0 2385 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 IGHV3OR15-7A0A075B7D8 119 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 AKR7A2O43488 359 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 GNAO1P09471 354 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 EGR1P18146 543 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 PRKACBP22694 351 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 SEC61A1P61619 476 aaKnown RBP18.26■□□□□ 0.51
SSPN-204ENST00000535504 ST3GAL4Q11206 333 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 SMIM21Q3B7S5 101 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 RPL22L1Q6P5R6 122 aaKnown RBP18.26■□□□□ 0.51
SSPN-204ENST00000535504 FAM90A1Q86YD7 464 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 NANPQ8TBE9 248 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 RASL12Q9NYN1 266 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 METRNQ9UJH8 293 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 DHDHQ9UQ10 334 aa18.26■□□□□ 0.51
SSPN-204ENST00000535504 LOC105371242A0A075B767 164 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 ENSAO43768 121 aaKnown RBP18.25■□□□□ 0.51
SSPN-204ENST00000535504 LIMS3P0CW19 117 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 LIMS4P0CW20 117 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 ZFP36P26651 326 aaKnown RBP18.25■□□□□ 0.51
SSPN-204ENST00000535504 ATP1B3P54709 279 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 NANOS3P60323 173 aaKnown RBP18.25■□□□□ 0.51
SSPN-204ENST00000535504 LRRC10Q5BKY1 277 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 WDR25Q64LD2 544 aaPredicted RBP18.25■□□□□ 0.51
SSPN-204ENST00000535504 NPRL2Q8WTW4 380 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 AQP3Q92482 292 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 MED30Q96HR3 178 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 DNTTIP1Q9H147 329 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 NLKQ9UBE8 527 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 DOCK11Q5JSL3 2073 aa18.25■□□□□ 0.51
SSPN-204ENST00000535504 PQLC2LA1A4F0 135 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 OR4C45A6NMZ5 311 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 NDUFB3O43676 98 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 CD2P06729 351 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 ETV1P50549 477 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 TAS2R43P59537 309 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 RIPK1Q13546 671 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 C11orf91Q3C1V1 193 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 ARMCX4Q5H9R4 360 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 DMRTC1Q5HYR2 192 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 LYPD2Q6UXB3 125 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 AHSA2Q719I0 299 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 OR52N1Q8NH53 320 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 NRG4Q8WWG1 115 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 RAB40AQ8WXH6 277 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 GGHQ92820 318 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 MYDGFQ969H8 173 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 FGGYQ96C11 551 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 CPNE2Q96FN4 548 aaPredicted RBP18.24■□□□□ 0.51
SSPN-204ENST00000535504 PKIBQ9C010 78 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 PLCXD1Q9NUJ7 323 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 KAAG1Q9UBP8 84 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 ERGIC3Q9Y282 383 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 INSIG2Q9Y5U4 225 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 AUP1Q9Y679 476 aa18.24■□□□□ 0.51
SSPN-204ENST00000535504 NXPH2O95156 264 aa18.23■□□□□ 0.51
SSPN-204ENST00000535504 ATP6V1G2O95670 118 aa18.23■□□□□ 0.51
SSPN-204ENST00000535504 ECDO95905 644 aaPredicted RBP18.23■□□□□ 0.51
SSPN-204ENST00000535504 GABRA2P47869 451 aa18.23■□□□□ 0.51
SSPN-204ENST00000535504 RBP2P50120 134 aa18.23■□□□□ 0.51
SSPN-204ENST00000535504 FIP1L1Q6UN15 594 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms