RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 TOX3O15405 576 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 CHP2O43745 196 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR1F1O43749 312 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 DPM1O60762 260 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 POP7O75817 140 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 EIF3GO75821 320 aaKnown RBP eCLIP2.69□□□□□ -1.98
USP48-215ENST00000534705 CBR3O75828 277 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ANXA9O76027 345 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 AP2A1O95782 977 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TXNDC12O95881 172 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 LALBAP00709 142 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CFDP00746 253 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 GLAP06280 429 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 MYL12AP19105 171 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 BCL3P20749 454 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 UQCRC2P22695 453 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ACKR3P25106 362 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 HTR1EP28566 365 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CD1CP29017 333 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 FCGR2CP31995 323 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 FEN1P39748 380 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 PMELP40967 661 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 KIR3DL2P43630 455 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CCT3P49368 545 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 RPL14P50914 215 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 RAB9AP51151 201 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 DUSP3P51452 185 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 CLDN8P56748 225 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SEC61GP60059 68 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PSPHP78330 225 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ACVR1Q04771 509 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ECH1Q13011 328 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ART3Q13508 389 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 FASTKQ14296 549 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 TRAM2Q15035 370 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TAF1AQ15573 450 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 OR1C1Q15619 314 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CHRNA6Q15825 494 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ISXQ2M1V0 245 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 RFX4Q33E94 735 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 LGALSLQ3ZCW2 172 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 RNF212Q495C1 297 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ACSF3Q4G176 576 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 C14orf28Q4W4Y0 310 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 XKR7Q5GH72 579 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 THEM4Q5T1C6 240 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PDZK1Q5T2W1 519 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PLCXD3Q63HM9 321 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SAXO2Q658L1 398 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 REP15Q6BDI9 236 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR4F3Q6IEY1 312 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PYHIN1Q6K0P9 492 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SLC25A25Q6KCM7 469 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ATRAIDQ6UW56 229 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CYHR1Q6ZMK1 362 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 Q6ZVQ6 151 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SSX9Q7RTT3 188 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 DPY19L4Q7Z388 723 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 GLT6D1Q7Z4J2 308 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 C17orf64Q86WR6 236 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 FUNDC1Q8IVP5 155 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 C10orf107Q8IVU9 208 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CDKL3Q8IVW4 592 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 SKA3Q8IX90 412 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 PIANPQ8IYJ0 282 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CYP4Z2PQ8N1L4 340 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SVOPLQ8N434 492 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR4K2Q8NGD2 314 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR8D4Q8NGM9 314 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR13C5Q8NGS8 318 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR2T4Q8NH00 348 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 GLYATL2Q8WU03 294 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SLC25A36Q96CQ1 311 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 MRPL53Q96EL3 112 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 PRRC1Q96M27 445 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TGM7Q96PF1 710 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR2M4Q96R27 311 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 CCNL2Q96S94 520 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 TBL1YQ9BQ87 522 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SLC30A2Q9BRI3 323 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TCEAL7Q9BRU2 100 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 NAT9Q9BTE0 207 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 TAPBPLQ9BX59 468 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SLC22A4Q9H015 551 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 OR2AG1Q9H205 316 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 LRRN3Q9H3W5 708 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 SAV1Q9H4B6 383 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 RGCCQ9H4X1 137 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ANKRD19PQ9H560 264 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 NT5DC2Q9H857 520 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ZNF160Q9HCG1 818 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 MYOZ1Q9NP98 299 aaPredicted RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 RBFOX1Q9NWB1 397 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 SDHAF2Q9NX18 166 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 ZNF319Q9P2F9 582 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 MYEF2Q9P2K5 600 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 METTL1Q9UBP6 276 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 MIOXQ9UGB7 285 aa2.69□□□□□ -1.98
USP48-215ENST00000534705 WARS2Q9UGM6 360 aaKnown RBP2.69□□□□□ -1.98
USP48-215ENST00000534705 POMT2Q9UKY4 750 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms