RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZNF702PQ9H963 129 aa17.28■□□□□ 0.36
SSH3-211ENST00000534112 SERTAD4Q9NUC0 356 aa17.28■□□□□ 0.36
SSH3-211ENST00000534112 AURKAIP1Q9NWT8 199 aaPredicted RBP17.28■□□□□ 0.36
SSH3-211ENST00000534112 TAGLN3Q9UI15 199 aa17.28■□□□□ 0.36
SSH3-211ENST00000534112 ZNF732B4DXR9 585 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 GLCEO94923 617 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 CAPZA1P52907 286 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 GNG3P63215 75 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 HABP2Q14520 560 aaPredicted RBP17.27■□□□□ 0.36
SSH3-211ENST00000534112 PGAM4Q8N0Y7 254 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 ZNF671Q8TAW3 534 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 OTULINQ96BN8 352 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 R3HDM4Q96D70 268 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 DGCR6LQ9BY27 220 aa17.27■□□□□ 0.36
SSH3-211ENST00000534112 LYNP07948 512 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 LGALS4P56470 323 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 RPL31P62899 125 aaKnown RBP17.26■□□□□ 0.35
SSH3-211ENST00000534112 TMEM200BQ69YZ2 307 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 KRT74Q7RTS7 529 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 NDUFA11Q86Y39 141 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 Q8N2B8 174 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 OR8B12Q8NGG6 310 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 OTOSQ8NHW6 89 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 THEM6Q8WUY1 208 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 LRP12Q9Y561 859 aa17.26■□□□□ 0.35
SSH3-211ENST00000534112 A0A1W2PPH5 198 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 VGLL3A8MV65 326 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 MTRF1O75570 445 aaKnown RBP17.25■□□□□ 0.35
SSH3-211ENST00000534112 COX7A1P24310 79 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 MAGEA2P43356 314 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 ERVFRD-1P60508 538 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 MICAQ29983 383 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 CEACAM21Q3KPI0 293 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 CEP78Q5JTW2 689 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 THAP5Q7Z6K1 395 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 ZNF454Q8N9F8 522 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 OR4F17Q8NGA8 305 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 PHF21AQ96BD5 680 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 OR4F4Q96R69 305 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 OR51V1Q9H2C8 321 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 RASL12Q9NYN1 266 aa17.25■□□□□ 0.35
SSH3-211ENST00000534112 FAM90A8PA6NJQ4 464 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 RFPL4AA6NLU0 287 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 ADARB2-AS1A8MUL3 147 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 RFPL4AL1F8VTS6 287 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 RAB13P51153 203 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 DMRTC1Q5HYR2 192 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 ZBTB37Q5TC79 503 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 CCBE1Q6UXH8 406 aaPredicted RBP17.24■□□□□ 0.35
SSH3-211ENST00000534112 CYP2R1Q6VVX0 501 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 LHFPL4Q7Z7J7 247 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 IQCF1Q8N6M8 205 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 CD177Q8N6Q3 437 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 FAM81AQ8TBF8 368 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 WIPF2Q8TF74 440 aaPredicted RBP17.24■□□□□ 0.35
SSH3-211ENST00000534112 AQP3Q92482 292 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 CITED2Q99967 270 aaPredicted RBP17.24■□□□□ 0.35
SSH3-211ENST00000534112 CDCA4Q9BXL8 241 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 VNN3Q9NY84 501 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 U3KQV3 271 aa17.24■□□□□ 0.35
SSH3-211ENST00000534112 hCG_1809904A0A1W2PP81 198 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 A0A1W2PPE2 198 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 A0A1W2PR64 198 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 A0A1W2PRV1 198 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 SELENOFO60613 162 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 MAP2K3P46734 347 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 PSMA6P60900 246 aaKnown RBP17.23■□□□□ 0.35
SSH3-211ENST00000534112 HAGHLQ6PII5 290 aaPredicted RBP17.23■□□□□ 0.35
SSH3-211ENST00000534112 ACP7Q6ZNF0 438 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 DYNAPQ8N1N2 210 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 OR4M1Q8NGD0 313 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 OR5A2Q8NGI9 324 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 NIPAL2Q9H841 368 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 USE1Q9NZ43 259 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 TCF19Q9Y242 345 aa17.23■□□□□ 0.35
SSH3-211ENST00000534112 SAMHD1Q9Y3Z3 626 aaKnown RBP17.23■□□□□ 0.35
SSH3-211ENST00000534112 CCL3L1P16619 93 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 PAICSP22234 425 aaKnown RBP17.22■□□□□ 0.35
SSH3-211ENST00000534112 PRDX2P32119 198 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 PLA1AQ53H76 456 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 CD300LDQ6UXZ3 194 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 ZNF561Q8N587 486 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 OR2T27Q8NH04 317 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 TEX47Q8TBZ9 253 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 NIPSNAP1Q9BPW8 284 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 TAS2R1Q9NYW7 299 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 KLHDC2Q9Y2U9 406 aa17.22■□□□□ 0.35
SSH3-211ENST00000534112 A6NDX4 124 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 OR5B21A6NL26 309 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 SLC1A7O00341 560 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 ATP6V1B2P21281 511 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 CNN3Q15417 329 aaKnown RBP17.21■□□□□ 0.35
SSH3-211ENST00000534112 SMIM21Q3B7S5 101 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 SPATS1Q496A3 300 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 FOXB2Q5VYV0 432 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 PLBD1Q6P4A8 553 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 ZNF782Q6ZMW2 699 aaPredicted RBP17.21■□□□□ 0.35
SSH3-211ENST00000534112 MOB3CQ70IA8 216 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 TMEM219Q86XT9 240 aa17.21■□□□□ 0.35
SSH3-211ENST00000534112 NSL1Q96IY1 281 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms