RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 KHDC3LQ587J8 217 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 COA6Q5JTJ3 125 aaKnown RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM69Q5SWH9 247 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM225Q6GV28 225 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 SLC35E4Q6ICL7 350 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 SLC39A4Q6P5W5 647 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 INO80CQ6PI98 192 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TBPL2Q6SJ96 375 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM205Q6UW68 189 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ENPP6Q6UWR7 440 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 HEPN1Q6WQI6 88 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 B3GLCTQ6Y288 498 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ZNF730Q6ZMV8 503 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 Q6ZPB1 254 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ACOT7LQ6ZUV0 252 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MBOAT2Q6ZWT7 520 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ADCK2Q7Z695 626 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 DEFB128Q7Z7B8 93 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 NIT1Q86X76 327 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM183AQ8IXX5 376 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ZNF444Q8N0Y2 327 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 BATF2Q8N1L9 274 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 KCNRGQ8N5I3 272 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 SLC35G3Q8N808 338 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR4D9Q8NGE8 314 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR52B6Q8NGF0 335 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR4P4Q8NGL7 312 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR9I1Q8NGQ6 314 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR1J2Q8NGS2 313 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 EEF1AKMT1Q8WVE0 214 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 DNAJB3Q8WWF6 145 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 SUSD6Q92537 303 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MCHR2Q969V1 340 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MOB3AQ96BX8 217 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 RNF125Q96EQ8 232 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 AKR1E2Q96JD6 320 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TEX37Q96LM6 180 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 JSRP1Q96MG2 331 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 KCTD7Q96MP8 289 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 CCDC115Q96NT0 180 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 CLCC1Q96S66 551 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MGLLQ99685 303 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 CHRDL1Q9BU40 450 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 FNDC11Q9BVV2 318 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TAPBPLQ9BX59 468 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 RTN4RQ9BZR6 473 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 RAB6CQ9H0N0 254 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ZBP1Q9H171 429 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM185BQ9H7F4 350 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 FN3KRPQ9HA64 309 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 LTB4R2Q9NPC1 389 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 ACP6Q9NPH0 428 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 RPS10P5Q9NQ39 176 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 EXOSC3Q9NQT5 275 aaKnown RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 SLC17A5Q9NRA2 495 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 TMEM100Q9NV29 134 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 OR5AC2Q9NZP5 309 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 MRPL27Q9P0M9 148 aaKnown RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 RPS6KB2Q9UBS0 482 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 STRAPQ9Y3F4 350 aaKnown RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 URGCP-MRPS24S4R325 110 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 BAZ2AQ9UIF9 1905 aaKnown RBP3.66□□□□□ -1.82
ITGB1-219ENST00000534049 REV3LO60673 3130 aa3.66□□□□□ -1.82
ITGB1-219ENST00000534049 YLPM1P49750 1951 aaKnown RBP3.65□□□□□ -1.82
ITGB1-219ENST00000534049 LOC105371242A0A075B767 164 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 A0A087WWC5 75 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 IGKV6D-41A0A0C4DH26 115 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 RNF222A6NCQ9 220 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 DHRS7CA6NNS2 312 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 E9PQ18 207 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 G3V3Q6 166 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 RNASEK-C17orf49H0YIS7 233 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 J3QR06 171 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 K7EQM0 130 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 APOC4-APOC2K7ER74 178 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 MANBAO00462 879 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 NME4O00746 187 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 ADAM20O43506 726 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 BCL2L11O43521 198 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 SYNGR3O43761 229 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 PCDH7O60245 1069 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 OR7C2O60412 319 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 CREBL2O60519 120 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-219ENST00000534049 SCELO95171 688 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 RAB36O95755 333 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 CST1P01037 141 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 IGHV4-39P01824 125 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 OR8U9P0C7N5 309 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 FAM106CPP0CH98 169 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 FABP4P15090 132 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 GPX2P18283 190 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 ADCYAP1P18509 176 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 CXCL3P19876 107 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 HRH2P25021 359 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 CXCR1P25024 350 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 IMPA1P29218 277 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 RBMS1P29558 406 aaKnown RBP3.65□□□□□ -1.83
ITGB1-219ENST00000534049 CEACAM3P40198 252 aa3.65□□□□□ -1.83
ITGB1-219ENST00000534049 ELK3P41970 407 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms