RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 DYNAPQ8N1N2 210 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF454Q8N9F8 522 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 BBS1Q8NFJ9 593 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 OR4C13Q8NGP0 309 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF488Q96MN9 340 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 HIST1H2AAQ96QV6 131 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 FAM234AQ9H0X4 552 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 LRP12Q9Y561 859 aa14.63□□□□□ -0.07
UBXN1-216ENST00000533908 TRBV23-1A0A0A0MS06 115 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 PRR32B1ATL7 298 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 H3BN98 237 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 PSMD9O00233 223 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 MTRF1O75570 445 aaKnown RBP14.62□□□□□ -0.07
UBXN1-216ENST00000533908 VSIG10L2P0DP72 767 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 ALOX5APP20292 161 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 HABP2Q14520 560 aaPredicted RBP14.62□□□□□ -0.07
UBXN1-216ENST00000533908 AANATQ16613 207 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 OXLD1Q5BKU9 147 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 LCN8Q6JVE9 175 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 TRPM8Q7Z2W7 1104 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 CPLX4Q7Z7G2 160 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 CPOQ8IVL8 374 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 OR2T6Q8NHC8 308 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 GIPC3Q8TF64 312 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 SERTAD4Q9NUC0 356 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 FAM206AQ9NX38 181 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 NOTCH3Q9UM47 2321 aa14.62□□□□□ -0.07
UBXN1-216ENST00000533908 RFPL4AA6NLU0 287 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 PRR23D1E9PI22 279 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 RFPL4AL1F8VTS6 287 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 PRR23D2P0DMB1 279 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 CCL3L1P16619 93 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 SLC2A5P22732 501 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 MAP2K3P46734 347 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 CEBPDP49716 269 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 RAB13P51153 203 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 BMXP51813 675 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 C11orf88Q6PI97 169 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 HAGHLQ6PII5 290 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 CCBE1Q6UXH8 406 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 ACP7Q6ZNF0 438 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 MOB3CQ70IA8 216 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 THAP5Q7Z6K1 395 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 PIGWQ7Z7B1 504 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 LHFPL4Q7Z7J7 247 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 DHFR2Q86XF0 187 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 OR4M1Q8NGD0 313 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 OR5A2Q8NGI9 324 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 OR5K1Q8NHB7 308 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF671Q8TAW3 534 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 RANBP3Q9H6Z4 567 aaPredicted RBP14.61□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF702PQ9H963 129 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF281Q9Y2X9 895 aa14.61□□□□□ -0.07
UBXN1-216ENST00000533908 FAM90A8PA6NJQ4 464 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 B2RBV5 119 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 SYNGR1O43759 233 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 IGLV3-1P01715 115 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 PAICSP22234 425 aaKnown RBP14.6□□□□□ -0.07
UBXN1-216ENST00000533908 COX7A1P24310 79 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 PRDX2P32119 198 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 CAPZA1P52907 286 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 CDK5Q00535 292 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 TRIM25Q14258 630 aaKnown RBP14.6□□□□□ -0.07
UBXN1-216ENST00000533908 FAM98BQ52LJ0 330 aaKnown RBP14.6□□□□□ -0.07
UBXN1-216ENST00000533908 LDLRAD2Q5SZI1 272 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 PAPD5Q8NDF8 572 aaKnown RBP14.6□□□□□ -0.07
UBXN1-216ENST00000533908 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 CLPTM1LQ96KA5 538 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 TEAD3Q99594 435 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 NIPAL2Q9H841 368 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 HEXA-AS1Q9H8Q6 139 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 NDE1Q9NXR1 346 aa14.6□□□□□ -0.07
UBXN1-216ENST00000533908 A0A0U1RQV5 110 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 ADARB2-AS1A8MUL3 147 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 CD28P10747 220 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 FAHP16930 419 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 RPL31P62899 125 aaKnown RBP14.59□□□□□ -0.07
UBXN1-216ENST00000533908 ZNF273Q14593 569 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 NSUN5P1Q3KNT7 163 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 KRT77Q7Z794 578 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 HS3ST5Q8IZT8 346 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 POC1AQ8NBT0 407 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 OR2T27Q8NH04 317 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 OR51E1Q8TCB6 317 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 WIPF2Q8TF74 440 aaPredicted RBP14.59□□□□□ -0.07
UBXN1-216ENST00000533908 MMP28Q9H239 520 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 GPR84Q9NQS5 396 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 RASL12Q9NYN1 266 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 ARL2BPQ9Y2Y0 163 aa14.59□□□□□ -0.07
UBXN1-216ENST00000533908 TMEM269A0A1B0GVZ9 245 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 OR5B21A6NL26 309 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 PRODHO43272 600 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 GYS2P54840 703 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 DLX6P56179 175 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 PLA1AQ53H76 456 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 TMEM236Q5W0B7 351 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 ZNF782Q6ZMW2 699 aaPredicted RBP14.58□□□□□ -0.08
UBXN1-216ENST00000533908 Q6ZS46 218 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 BATF2Q8N1L9 274 aa14.58□□□□□ -0.08
UBXN1-216ENST00000533908 NKX3-1Q99801 234 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms