RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 SLURP1P55000 103 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 RUNX1Q01196 453 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 OGFOD2Q6N063 350 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 SMARCD3Q6STE5 483 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 LINC00322Q6ZN03 302 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 BPIFA2Q96DR5 249 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF714Q96N38 554 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF570Q96NI8 536 aa8.1□□□□□ -1.11
CSDE1-215ENST00000533818 PAIP1Q9H074 479 aaKnown RBP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 PNRC2Q9NPJ4 139 aaKnown RBP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 CHCHD3Q9NX63 227 aaKnown RBP8.1□□□□□ -1.11
CSDE1-215ENST00000533818 SRRM2Q9UQ35 2752 aaKnown RBP8.09□□□□□ -1.11
CSDE1-215ENST00000533818 OR6C68A6NDL8 312 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 M0QX08 132 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 FGF16O43320 207 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 CNIH1O95406 144 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 IGHG4P01861 327 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 CD14P08571 375 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 IFI30P13284 250 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 DCTDP32321 178 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 TAS2R41P59536 307 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 CBX1P83916 185 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 FAM3AP98173 230 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 BDH1Q02338 343 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 HNF4GQ14541 408 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 FAM53AQ6NSI3 398 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-215ENST00000533818 DRAM2Q6UX65 266 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 MSANTD1Q6ZTZ1 278 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 SLC16A9Q7RTY1 509 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 OAFQ86UD1 273 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 THNSL2Q86YJ6 484 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 ANKRD13BQ86YJ7 626 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 ZDHHC23Q8IYP9 409 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 Q8N1X5 172 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 ABHD12Q8N2K0 398 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 ZNF781Q8N8C0 355 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 SPSB4Q96A44 273 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 RNF170Q96K19 258 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 UBE2E2Q96LR5 201 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 TMEM38AQ9H6F2 299 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 NMNAT1Q9HAN9 279 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-215ENST00000533818 RIMS3Q9UJD0 308 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 VSIG4Q9Y279 399 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 DNAH2Q9P225 4427 aa8.09□□□□□ -1.11
CSDE1-215ENST00000533818 PSMD9O00233 223 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 RIPK2O43353 540 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 XRCC2O43543 280 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 SERPINA1P01009 418 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 IGLV1-51P01701 117 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 IGF1P05019 195 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 SLC2A1P11166 492 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 PSMB8P28062 276 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 CEACAM3P40198 252 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 SLC9A3P48764 834 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 EDDM3BP56851 147 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 ESRRGP62508 458 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 PITPNAQ00169 270 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 KRR1Q13601 381 aaKnown RBP8.08□□□□□ -1.12
CSDE1-215ENST00000533818 FHL1Q13642 323 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 HES1Q14469 280 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 ANKDD1AQ495B1 522 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 CCDC144NLQ6NUI1 221 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 GTSCR1Q86UQ5 136 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 PGAM4Q8N0Y7 254 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF671Q8TAW3 534 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF596Q8TC21 504 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 OR5P3Q8WZ94 311 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 GTF2H4Q92759 462 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 KCTD12Q96CX2 325 aaKnown RBP8.08□□□□□ -1.12
CSDE1-215ENST00000533818 TSSK2Q96PF2 358 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 OR51J1Q9H342 316 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 RASL12Q9NYN1 266 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 STUB1Q9UNE7 303 aa8.08□□□□□ -1.12
CSDE1-215ENST00000533818 HTR3EA5X5Y0 456 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 ARRDC5A6NEK1 342 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 XRCC3O43542 346 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 ITM2AO43736 263 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 RRP9O43818 475 aaKnown RBP8.07□□□□□ -1.12
CSDE1-215ENST00000533818 CDK2AP2O75956 126 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 TMEM11P17152 192 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 RHCEP18577 417 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 OTX1P32242 354 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-215ENST00000533818 EWSR1Q01844 656 aaKnown RBP eCLIP8.07□□□□□ -1.12
CSDE1-215ENST00000533818 TIGD6Q17RP2 521 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 SLC36A3Q495N2 470 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 TPTE2P1Q5T6R2 138 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 CCDC80Q76M96 950 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 TRMT10CQ7L0Y3 403 aaKnown RBP8.07□□□□□ -1.12
CSDE1-215ENST00000533818 FAM122BQ7Z309 247 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF491Q8N8L2 437 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 OR13C2Q8NGS9 318 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 MYOZ3Q8TDC0 251 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 RNF166Q96A37 237 aaPredicted RBP8.07□□□□□ -1.12
CSDE1-215ENST00000533818 OR8B4Q96RC9 309 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 RSRP1Q9BUV0 290 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 SCRT2Q9NQ03 307 aa8.07□□□□□ -1.12
CSDE1-215ENST00000533818 NDE1Q9NXR1 346 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms