RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 CEACAM3P40198 252 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 PCBP3P57721 371 aaKnown RBP10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 DGCR2P98153 550 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 LGI3Q8N145 548 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 VWCEQ96DN2 955 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 ZNF75AQ96N20 296 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 PDCD1LG2Q9BQ51 273 aa10.03□□□□□ -0.8
AMBRA1-211ENST00000533727 MYO16Q9Y6X6 1858 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 TRAV38-1A0A0B4J264 116 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 TMEM235A6NFC5 223 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 PRR19A6NJB7 356 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 JTBO76095 146 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 EFEMP2O95967 443 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 ACSM4P0C7M7 580 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 MGMTP16455 207 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 CPEP16870 476 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 PTAFRP25105 342 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 COTL1Q14019 142 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 CTF1Q16619 201 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 RNLSQ5VYX0 342 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 BRICD5Q6PL45 260 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 DBX2Q6ZNG2 339 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 OSR2Q8N2R0 312 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 PTP4A1Q93096 173 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 DAZAP1Q96EP5 407 aaKnown RBP10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 DOK1Q99704 481 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 POFUT1Q9H488 388 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 TMEM231Q9H6L2 316 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 TAAR3PQ9P1P4 343 aa10.02□□□□□ -0.8
AMBRA1-211ENST00000533727 C1QAP02745 245 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 SPNP16150 400 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 TLE1Q04724 770 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 TAF9Q16594 264 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 FAM209AQ5JX71 171 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 GAL3ST2Q9H3Q3 398 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 SNRPGP15A8MWD9 76 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 CCSO14618 274 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 H3F3AP84243 136 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 TIAL1Q01085 375 aaKnown RBP eCLIP10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 PLA1AQ53H76 456 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 SFT2D1Q8WV19 159 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 ATXN7O15265 892 aaPredicted RBP10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 HPNP05981 417 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 CTSSP25774 331 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 SKP2Q13309 424 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 PHYHD1Q5SRE7 291 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 ATPAF1Q5TC12 328 aaPredicted RBP10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 CBLN3Q6UW01 205 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 BAP18Q8IXM2 172 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 TMEM251Q8N6I4 163 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 ADPRHL1Q8NDY3 354 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 SEH1LQ96EE3 360 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 BSCL2Q96G97 398 aaPredicted RBP10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 UBTD1Q9HAC8 227 aa10.02□□□□□ -0.81
AMBRA1-211ENST00000533727 OR5H14A6NHG9 310 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 DCTN6O00399 190 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CLN5O75503 358 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 SFRP5Q5T4F7 317 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 TUSC5Q8IXB3 177 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CGGBP1Q9UFW8 167 aaPredicted RBP10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 EFSO43281 561 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 HLA-DOBP13765 273 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CDAP32320 146 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 MDH2P40926 338 aaKnown RBP10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 PSMB3P49720 205 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 THBS3P49746 956 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 HMGA2P52926 109 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 TESK1Q15569 626 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 RDH5Q92781 318 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 TMEM18Q96B42 140 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 PELI1Q96FA3 418 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 DLL4Q9NR61 685 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 J3QR89 54 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 IFNL4K9M1U5 179 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 DHRS3O75911 302 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 BMI1P35226 326 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 RFX2P48378 723 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 C12orf73Q69YU5 71 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 ASCL5Q7RTU5 278 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CCDC190Q86UF4 302 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 ASB10Q8WXI3 467 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 C10orf35Q96D05 121 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 C4orf45Q96LM5 186 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 SLC23A1Q9UHI7 598 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 ZNF230Q9UIE0 474 aaPredicted RBP10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CES1P1Q9UKY3 287 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 CSAG2Q9Y5P2 127 aa10.01□□□□□ -0.81
AMBRA1-211ENST00000533727 hADV38S2A0JD32 116 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 MGST1P10620 155 aaKnown RBP10□□□□□ -0.81
AMBRA1-211ENST00000533727 PSMB6P28072 239 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 VAMP3Q15836 100 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 C2orf76Q3KRA6 126 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 RHOUQ7L0Q8 258 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 FAM214BQ7L5A3 538 aa10□□□□□ -0.81
AMBRA1-211ENST00000533727 C15orf54Q8N8G6 183 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms