RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 FAHP16930 419 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 EEF1B2P24534 225 aaKnown RBP12.72□□□□□ -0.37
CPSF1-211ENST00000533492 EPHA2P29317 976 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 ZNF684Q5T5D7 378 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 AADACL4Q5VUY2 407 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 C12orf73Q69YU5 71 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 KDM4DQ6B0I6 523 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 HAGHLQ6PII5 290 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-211ENST00000533492 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 KIR3DL3Q8N743 410 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 OR4F5Q8NH21 305 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 GAFA1Q96PS6 74 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 CHIAQ9BZP6 476 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 MOB1AQ9H8S9 216 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 BEX1Q9HBH7 125 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 SIRT7Q9NRC8 400 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 OR52A1Q9UKL2 312 aa12.72□□□□□ -0.37
CPSF1-211ENST00000533492 CAB39Q9Y376 341 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-211ENST00000533492 A0A0U1RQK1 487 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 A0A1W2PQ09 198 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 SIGLEC5O15389 551 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 MAGEB4O15481 346 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-211ENST00000533492 IGLV3-1P01715 115 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 TTRP02766 147 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 TFF1P04155 84 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 EFNB1P98172 346 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 GUCA2AQ02747 115 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 EGR3Q06889 387 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-211ENST00000533492 DGUOKQ16854 277 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 BCL2L15Q5TBC7 163 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 OR51G2Q8NGK0 314 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 NPRL2Q8WTW4 380 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 LRTOMTQ8WZ04 291 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 GABARAPL1Q9H0R8 117 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 SLITRK2Q9H156 845 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 ADGRL4Q9HBW9 690 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 CLN6Q9NWW5 311 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 SNX5Q9Y5X3 404 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 R4GMQ9 66 aa12.71□□□□□ -0.37
CPSF1-211ENST00000533492 CIB2O75838 187 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 KNG1P01042 644 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 PSG2P11465 335 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 CAPZA1P52907 286 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 RAG2P55895 527 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 CAV3P56539 151 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 BLMHQ13867 455 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 CLVS2Q5SYC1 327 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
CPSF1-211ENST00000533492 PLEKHG7Q6ZR37 379 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 ZNF573Q86YE8 665 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 ELMOD2Q8IZ81 293 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 TMEM185AQ8NFB2 350 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 C8orf46Q8TAG6 207 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 AQP3Q92482 292 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 DYRK2Q92630 601 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 DUS3LQ96G46 650 aaKnown RBP12.7□□□□□ -0.38
CPSF1-211ENST00000533492 CIB1Q99828 191 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 SEMA6AQ9H2E6 1030 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 DPAGT1Q9H3H5 408 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 RASL12Q9NYN1 266 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 WARS2Q9UGM6 360 aaKnown RBP12.7□□□□□ -0.38
CPSF1-211ENST00000533492 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
CPSF1-211ENST00000533492 SRSF10O75494 262 aaKnown RBP12.69□□□□□ -0.38
CPSF1-211ENST00000533492 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
CPSF1-211ENST00000533492 IGHV4-59P01825 116 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 KRT8P05787 483 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 FBP1P09467 338 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 IER3P46695 156 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 HAAOP46952 286 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 PRB3Q04118 309 aaPredicted RBP12.69□□□□□ -0.38
CPSF1-211ENST00000533492 PRR31Q5SQ13 230 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 C17orf107Q6ZR85 190 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 C1orf122Q6ZSJ8 110 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 Q8N7P7 452 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 ZNRF1Q8ND25 227 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 CENPNQ96H22 339 aaPredicted RBP12.69□□□□□ -0.38
CPSF1-211ENST00000533492 TBX5Q99593 518 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 GPR173Q9NS66 373 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 C1RLQ9NZP8 487 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 MRM2Q9UI43 246 aaKnown RBP12.69□□□□□ -0.38
CPSF1-211ENST00000533492 MAB21L2Q9Y586 359 aa12.69□□□□□ -0.38
CPSF1-211ENST00000533492 IGKV1D-17A0A075B6S4 117 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 BTBD17A6NE02 478 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 M0R1W7 72 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 DLGAP1O14490 977 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 NDUFA7O95182 113 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 PAHP00439 452 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 OR2T7P0C7T2 308 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 POLR2IP36954 125 aaKnown RBP12.68□□□□□ -0.38
CPSF1-211ENST00000533492 DLX1P56177 255 aa12.68□□□□□ -0.38
CPSF1-211ENST00000533492 RPL15P61313 204 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms