RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 INSIG2Q9Y5U4 225 aa17.04■□□□□ 0.32
CCS-208ENST00000533244 PQLC2LA1A4F0 135 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 IRGMA1A4Y4 181 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 ANKRD61A6NGH8 418 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 A6NIN4 97 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 H0YJX3 145 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 GYPAP02724 150 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 MRPL28Q13084 256 aaKnown RBP17.03■□□□□ 0.32
CCS-208ENST00000533244 ALKBH1Q13686 389 aaKnown RBP17.03■□□□□ 0.32
CCS-208ENST00000533244 MICBQ29980 383 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 AQP3Q92482 292 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 CHST5Q9GZS9 411 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 PLEKHA1Q9HB21 404 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 CLN8Q9UBY8 286 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 OR5V1Q9UGF6 321 aa17.03■□□□□ 0.32
CCS-208ENST00000533244 IGHV3OR15-7A0A075B7D8 119 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 H3BSH0 61 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 ADAM20O43506 726 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 FCN3O75636 299 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 RHBDL1O75783 438 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 IFNA2P01563 188 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 NPY4RP50391 375 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 TEX29Q8N6K0 151 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 HAVCR2Q8TDQ0 301 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 SEH1LQ96EE3 360 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 WDR13Q9H1Z4 485 aa17.02■□□□□ 0.31
CCS-208ENST00000533244 DIMT1Q9UNQ2 313 aaKnown RBP17.02■□□□□ 0.31
CCS-208ENST00000533244 E9PI62 339 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 AKR7A2O43488 359 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 FSHBP01225 129 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 AMY2BP19961 511 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 SRP14P37108 136 aaKnown RBP17.01■□□□□ 0.31
CCS-208ENST00000533244 TGM4P49221 684 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 UBE2V2Q15819 145 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 ATPAF1Q5TC12 328 aaPredicted RBP17.01■□□□□ 0.31
CCS-208ENST00000533244 STUMQ69YW2 141 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 HAGHLQ6PII5 290 aaPredicted RBP17.01■□□□□ 0.31
CCS-208ENST00000533244 C1QL2Q7Z5L3 287 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 PP6455Q8WZ26 134 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 TECTBQ96PL2 329 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 C7orf69Q9H7B7 122 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 SMURF1Q9HCE7 757 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 ERVK-18Q9QC07 812 aa17.01■□□□□ 0.31
CCS-208ENST00000533244 LOC105371242A0A075B767 164 aa17■□□□□ 0.31
CCS-208ENST00000533244 IGHV2-70DA0A0C4DH43 119 aa17■□□□□ 0.31
CCS-208ENST00000533244 J3QT63 122 aa17■□□□□ 0.31
CCS-208ENST00000533244 PIPP12273 146 aaPredicted RBP17■□□□□ 0.31
CCS-208ENST00000533244 MPZP25189 248 aa17■□□□□ 0.31
CCS-208ENST00000533244 ETV1P50549 477 aa17■□□□□ 0.31
CCS-208ENST00000533244 PAX8Q06710 450 aa17■□□□□ 0.31
CCS-208ENST00000533244 ZNF573Q86YE8 665 aa17■□□□□ 0.31
CCS-208ENST00000533244 OR10AC1Q8NH08 325 aa17■□□□□ 0.31
CCS-208ENST00000533244 RAB40AQ8WXH6 277 aa17■□□□□ 0.31
CCS-208ENST00000533244 ADAT3Q96EY9 351 aaPredicted RBP17■□□□□ 0.31
CCS-208ENST00000533244 DNTTIP1Q9H147 329 aa17■□□□□ 0.31
CCS-208ENST00000533244 PLCXD1Q9NUJ7 323 aa17■□□□□ 0.31
CCS-208ENST00000533244 HHLA2Q9UM44 414 aa17■□□□□ 0.31
CCS-208ENST00000533244 CAB39Q9Y376 341 aaPredicted RBP17■□□□□ 0.31
CCS-208ENST00000533244 NOS1APO75052 506 aaPredicted RBP16.99■□□□□ 0.31
CCS-208ENST00000533244 GATBO75879 557 aaKnown RBP16.99■□□□□ 0.31
CCS-208ENST00000533244 HAAOP46952 286 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 AQP4P55087 323 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 POC1AQ8NBT0 407 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 OR51A4Q8NGJ6 313 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 ZNF671Q8TAW3 534 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 RPS4Y2Q8TD47 263 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 GGHQ92820 318 aa16.99■□□□□ 0.31
CCS-208ENST00000533244 CNOT2Q9NZN8 540 aaKnown RBP16.99■□□□□ 0.31
CCS-208ENST00000533244 EXOSC1Q9Y3B2 195 aaKnown RBP16.99■□□□□ 0.31
CCS-208ENST00000533244 KIR2DS1A0A191URI9 304 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 A0A1B0GW55 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 TMEM212A6NML5 194 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 C22orf46C9J442 243 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 TMPRSS2O15393 492 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 SYNGR1O43759 233 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 ZFPL1O95159 310 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 CCDC159P0C7I6 412 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L2P0CJ85 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L3P0CJ86 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L4P0CJ87 422 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L5P0CJ88 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L6P0CJ89 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L7P0CJ90 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 GBX2P52951 348 aaPredicted RBP16.98■□□□□ 0.31
CCS-208ENST00000533244 C11orf91Q3C1V1 193 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4L9Q6RFH8 374 aaPredicted RBP16.98■□□□□ 0.31
CCS-208ENST00000533244 UTS2BQ765I0 119 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 ZNF676Q8N7Q3 588 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 ANGPTL6Q8NI99 470 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 TMEM80Q96HE8 168 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 CCL13Q99616 98 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 DUX4Q9UBX2 424 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 SLC7A11Q9UPY5 501 aa16.98■□□□□ 0.31
CCS-208ENST00000533244 EFCAB10A6NFE3 127 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 RPSAP08865 295 aaKnown RBP16.97■□□□□ 0.31
CCS-208ENST00000533244 ACAA1P09110 424 aaPredicted RBP16.97■□□□□ 0.31
CCS-208ENST00000533244 PGA5P0DJD9 388 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 ADRA2CP18825 462 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 GLRA1P23415 457 aa16.97■□□□□ 0.31
CCS-208ENST00000533244 FUT6P51993 359 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms