RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 TMED1Q13445 227 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 LSAMPQ13449 338 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 BEAN1Q3B7T3 259 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 TEX36Q5VZQ5 186 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 ANKRD13BQ86YJ7 626 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 C11orf53Q8IXP5 236 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 LY6G5BQ8NDX9 201 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 SDR9C7Q8NEX9 313 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 FANK1Q8TC84 345 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 CCL13Q99616 98 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 OR52D1Q9H346 318 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 SIRT7Q9NRC8 400 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 MRPL15Q9P015 296 aaKnown RBP14.22□□□□□ -0.13
PKP3-208ENST00000531857 ONECUT1Q9UBC0 465 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 DNAJB11Q9UBS4 358 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 ZNF281Q9Y2X9 895 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 CDH10Q9Y6N8 788 aa14.22□□□□□ -0.13
PKP3-208ENST00000531857 A0A1W2PRD5 423 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 A0A1W2PRF3 423 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 A0A1W2PRM7 423 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 RNASEK-C17orf49H0YIS7 233 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 PRB2P02812 416 aaPredicted RBP14.21□□□□□ -0.13
PKP3-208ENST00000531857 HTR1AP08908 422 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 PSKH1P11801 424 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 SLC6A6P31641 620 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 GINS1Q14691 196 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 PCK2Q16822 640 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 C11orf91Q3C1V1 193 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 SLC35E4Q6ICL7 350 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 OR52L1Q8NGH7 329 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 OR56B2PQ8NGI1 322 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 GGHQ92820 318 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 SPTSSAQ969W0 71 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 SEH1LQ96EE3 360 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 IFT27Q9BW83 186 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 ACOT13Q9NPJ3 140 aa14.21□□□□□ -0.13
PKP3-208ENST00000531857 MRPS18AQ9NVS2 196 aaKnown RBP14.21□□□□□ -0.13
PKP3-208ENST00000531857 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.21□□□□□ -0.132e-7■■■□□ 15.9
PKP3-208ENST00000531857 BHLHE40O14503 412 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 SLC22A1O15245 554 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 FBP1P09467 338 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 OTX1P32242 354 aaPredicted RBP14.2□□□□□ -0.14
PKP3-208ENST00000531857 PYCR1P32322 319 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 TGFBR2P37173 567 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 SLC15A1P46059 708 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 KLRD1Q13241 179 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 WDR38Q5JTN6 314 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 METAP1DQ6UB28 335 aaPredicted RBP14.2□□□□□ -0.14
PKP3-208ENST00000531857 AHSA2Q719I0 299 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 WDR86Q86TI4 376 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 PNKDQ8N490 385 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 FAM216BQ8N7L0 139 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 Q8N7P7 452 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 SPERTQ8NA61 448 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 OR2T33Q8NG76 320 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 LRRC29Q8WV35 223 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 ZNRF4Q8WWF5 429 aa14.2□□□□□ -0.14
PKP3-208ENST00000531857 WARS2Q9UGM6 360 aaKnown RBP14.2□□□□□ -0.14
PKP3-208ENST00000531857 BTBD17A6NE02 478 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 TVP23AA6NH52 213 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.19□□□□□ -0.14
PKP3-208ENST00000531857 NPFFO15130 113 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 MT-ND2P03891 347 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 SLC2A1P11166 492 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 NOS3P29474 1203 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 GRK5P34947 590 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 EFNB1P98172 346 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 SNAPC1Q16533 368 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 TIMM50Q3ZCQ8 353 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 SLC35F1Q5T1Q4 408 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 GPR107Q5VW38 600 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 LYPD4Q6UWN0 246 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 DRAM2Q6UX65 266 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 Q6ZPA2 131 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 ZNF367Q7RTV3 350 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 TMEM163Q8TC26 289 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 NPRL2Q8WTW4 380 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 C12orf43Q96C57 262 aaKnown RBP14.19□□□□□ -0.14
PKP3-208ENST00000531857 TMEM80Q96HE8 168 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 PPA2Q9H2U2 334 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 C14orf119Q9NWQ9 140 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 PAK1IP1Q9NWT1 392 aaPredicted RBP14.19□□□□□ -0.14
PKP3-208ENST00000531857 SIGLEC9Q9Y336 463 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 CAB39Q9Y376 341 aaPredicted RBP14.19□□□□□ -0.14
PKP3-208ENST00000531857 N6AMT1Q9Y5N5 214 aa14.19□□□□□ -0.14
PKP3-208ENST00000531857 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.18□□□□□ -0.14
PKP3-208ENST00000531857 PRODHO43272 600 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 ZNF823P16415 610 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 AMY2BP19961 511 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 PRKXP51817 358 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 ST3GAL4Q11206 333 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 RAB40BQ12829 278 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 IRF3Q14653 427 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 MICBQ29980 383 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 KPRPQ5T749 579 aaPredicted RBP14.18□□□□□ -0.14
PKP3-208ENST00000531857 PPP1R3EQ9H7J1 279 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 TBC1D23Q9NUY8 699 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 CHCHD3Q9NX63 227 aaKnown RBP14.18□□□□□ -0.14
PKP3-208ENST00000531857 TVP23BQ9NYZ1 205 aa14.18□□□□□ -0.14
PKP3-208ENST00000531857 KCNG2Q9UJ96 466 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms